End-to-end RNA Design using deep reinforcement learning
☆72Sep 26, 2022Updated 3 years ago
Alternatives and similar repositories for learna
Users that are interested in learna are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Eterna100-V2 benchmarking results and scripts☆13Oct 21, 2025Updated 5 months ago
- A Foundation Language Model For Multilayer Regulation of RNA☆21Nov 30, 2025Updated 4 months ago
- Python wrapper to design RNA molecules using RNAblueprint, RNARedPrint and for energy evaluations ViennaRNA, Hotknots, pKiss and Nupack.☆22Sep 17, 2018Updated 7 years ago
- An analysis of a new experimentally-derived nucleic acid binding chemical library☆28Jan 27, 2023Updated 3 years ago
- MCTS-RNA is a computational tool for solving RNA inverse folding problem with controlling the GC-content of the RNA sequence very precise…☆13Apr 3, 2017Updated 9 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Training Multiple agents in the same environment to collaborate and compete with each other☆12Dec 1, 2019Updated 6 years ago
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆70Jul 22, 2024Updated last year
- Differentiable RNA folding in JAX☆27Mar 25, 2025Updated last year
- RNA Structural Bioinformatics Crash Course & Data Science in Python☆13Oct 19, 2022Updated 3 years ago
- pytorch implementation for "RNA Secondary Structure Prediction By Learning Unrolled Algorithms"☆122Apr 7, 2024Updated 2 years ago
- AnnapuRNA: a scoring function for predicting RNA-small molecule interactions.☆21Apr 5, 2024Updated 2 years ago
- Deep learning to solve RNA design puzzles☆20Feb 4, 2025Updated last year
- Scalable Deep Learning for RNA Secondary Structure Prediction☆42Sep 23, 2025Updated 6 months ago
- ☆21Oct 15, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆65Apr 3, 2026Updated 2 weeks ago
- [NeurIPS 2022] Leveraging Factored Action Spaces for Efficient Offline RL in Healthcare. https://arxiv.org/abs/2305.01738☆11Nov 27, 2022Updated 3 years ago
- Nature Computational Science: RhoDesign is a structure-to-sequence model for RNA design.☆61Nov 8, 2024Updated last year
- Script to facilitate the making of horizontal scripts☆18May 25, 2024Updated last year
- The first collection of surrogate benchmarks for Joint Architecture and Hyperparameter Search.☆15Mar 22, 2023Updated 3 years ago
- Probabilistic Solution of Differential Equations☆13Jun 19, 2022Updated 3 years ago
- The new source code of the LinearFold, linear-time prediction for RNA secondary structures☆189Apr 4, 2024Updated 2 years ago
- Saluki, a method to predict mRNA half-lives from sequence☆27Oct 7, 2022Updated 3 years ago
- Software for detecting non-covalent interactions formed within complexes of nucleic acids with ligands.☆30Jun 3, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Linear-Time Approximation of RNA Folding Partition Function and Base Pairing Probabilities☆35May 24, 2024Updated last year
- OPUS-Rota4: A Gradient-Based Protein Side-Chain Modeling Framework Assisted by Deep Learning-Based Predictors☆11Apr 14, 2022Updated 4 years ago
- A repository for neural representational learning of RNA secondary structures☆32Feb 13, 2020Updated 6 years ago
- ☆14Jan 11, 2022Updated 4 years ago
- Code for "Maximizing Acquisition Functions for Bayesian Optimization"☆13Nov 27, 2018Updated 7 years ago
- The ViennaRNA Package☆396Feb 24, 2026Updated last month
- RNA Multiple Sequence Alignment☆51Jul 20, 2023Updated 2 years ago
- Sample-Efficient Automated Deep Reinforcement Learning☆34Mar 17, 2021Updated 5 years ago
- Comparison of active site and full kinase sequences for drug-target affinity prediction and molecular generation. Full paper: https://pub…☆37Oct 3, 2022Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Awesome AI-aided Drug Discovery☆37Jun 6, 2024Updated last year
- RIblast is ultrafast RNA-RNA interaction prediction software based on seed-and-extension algorithm for comprehensive lncRNA interactome a…☆18May 9, 2023Updated 2 years ago
- Centroid RNA package☆20Oct 12, 2020Updated 5 years ago
- A pipeline for structural clustering of RNA secondary structures☆15Apr 21, 2021Updated 4 years ago
- ☆35Nov 4, 2021Updated 4 years ago
- Single-sequence and Profile-based Prediction of RNA Solvent Accessibility Using Dilated Convolution Neural Network☆13Jun 22, 2022Updated 3 years ago
- The bioplib library☆12Jul 25, 2023Updated 2 years ago