End-to-end RNA Design using deep reinforcement learning
☆73Sep 26, 2022Updated 3 years ago
Alternatives and similar repositories for learna
Users that are interested in learna are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Eterna100-V2 benchmarking results and scripts☆14May 19, 2026Updated 3 months ago
- Python wrapper to design RNA molecules using RNAblueprint, RNARedPrint and for energy evaluations ViennaRNA, Hotknots, pKiss and Nupack.☆22Sep 17, 2018Updated 7 years ago
- A Foundation Language Model For Multilayer Regulation of RNA☆22Nov 30, 2025Updated 8 months ago
- An analysis of a new experimentally-derived nucleic acid binding chemical library☆33Jan 27, 2023Updated 3 years ago
- Code associated with the publication 'Generative and predictive neural networks for the design of functional RNA molecules'☆15Apr 8, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- MCTS-RNA is a computational tool for solving RNA inverse folding problem with controlling the GC-content of the RNA sequence very precise…☆13Apr 3, 2017Updated 9 years ago
- Training Multiple agents in the same environment to collaborate and compete with each other☆12Dec 1, 2019Updated 6 years ago
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆70Jul 22, 2024Updated 2 years ago
- pytorch implementation for "RNA Secondary Structure Prediction By Learning Unrolled Algorithms"☆123Apr 7, 2024Updated 2 years ago
- AnnapuRNA: a scoring function for predicting RNA-small molecule interactions.☆21Apr 5, 2024Updated 2 years ago
- Nature Computational Science: RhoDesign is a structure-to-sequence model for RNA design.☆65Nov 8, 2024Updated last year
- A deep learning method for the prediction of internal ribosome entry sites (IRES) of circRNAs☆17Jul 6, 2025Updated last year
- [NeurIPS 2022] Leveraging Factored Action Spaces for Efficient Offline RL in Healthcare. https://arxiv.org/abs/2305.01738☆11Nov 27, 2022Updated 3 years ago
- Code repository of "Deep generative design of RNA family sequences"☆43Apr 8, 2026Updated 4 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A Foundation Language Model For Multilayer Regulation of RNA☆15Nov 5, 2025Updated 9 months ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆68May 8, 2026Updated 3 months ago
- Scalable Deep Learning for RNA Secondary Structure Prediction☆43Sep 23, 2025Updated 11 months ago
- The first collection of surrogate benchmarks for Joint Architecture and Hyperparameter Search.☆15Mar 22, 2023Updated 3 years ago
- Differentiable RNA folding in JAX☆31Mar 25, 2025Updated last year
- Script to facilitate the making of horizontal scripts☆18May 25, 2024Updated 2 years ago
- Probabilistic Solution of Differential Equations☆13Jun 19, 2022Updated 4 years ago
- An end-to-end linear-time algorithm for structural alignment and conserved structure prediction of RNA homologs☆13Jun 28, 2024Updated 2 years ago
- The new source code of the LinearFold, linear-time prediction for RNA secondary structures☆200Apr 4, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A collection of tools that generate and analyse side-chain rotamer libraries☆10Aug 15, 2026Updated last week
- Saluki, a method to predict mRNA half-lives from sequence☆28Oct 7, 2022Updated 3 years ago
- Linear-Time Approximation of RNA Folding Partition Function and Base Pairing Probabilities☆36May 24, 2024Updated 2 years ago
- OPUS-Rota4: A Gradient-Based Protein Side-Chain Modeling Framework Assisted by Deep Learning-Based Predictors☆11Apr 14, 2022Updated 4 years ago
- Software for detecting non-covalent interactions formed within complexes of nucleic acids with ligands.☆34Jun 3, 2022Updated 4 years ago
- A repository for neural representational learning of RNA secondary structures☆33Feb 13, 2020Updated 6 years ago
- Centroid RNA package☆20Oct 12, 2020Updated 5 years ago
- The ViennaRNA Package☆426Feb 24, 2026Updated 6 months ago
- Code for "Maximizing Acquisition Functions for Bayesian Optimization"☆13Nov 27, 2018Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Comparison of active site and full kinase sequences for drug-target affinity prediction and molecular generation. Full paper: https://pub…☆37Oct 3, 2022Updated 3 years ago
- RIblast is ultrafast RNA-RNA interaction prediction software based on seed-and-extension algorithm for comprehensive lncRNA interactome a…☆18May 9, 2023Updated 3 years ago
- Sample-Efficient Automated Deep Reinforcement Learning☆34Mar 17, 2021Updated 5 years ago
- ☆14Dec 2, 2022Updated 3 years ago
- This is the code of reproducing the results of our paper: On the importance of Hyperparameter Optimization for Model-based Reinforcement …☆16Aug 19, 2021Updated 5 years ago
- A pipeline for structural clustering of RNA secondary structures☆15Apr 21, 2021Updated 5 years ago
- Single-sequence and Profile-based Prediction of RNA Solvent Accessibility Using Dilated Convolution Neural Network☆13Jun 22, 2022Updated 4 years ago