BioinfoMachineLearning / DeepInteractLinks
A geometric deep learning framework (Geometric Transformers) for predicting protein interface contacts. (ICLR 2022)
☆64Updated 2 years ago
Alternatives and similar repositories for DeepInteract
Users that are interested in DeepInteract are comparing it to the libraries listed below
Sorting:
- Code for "Protein Docking Model Evaluation by Graph Neural Networks"☆59Updated 2 years ago
- The Enhanced Database of Interacting Protein Structures for Interface Prediction☆49Updated last year
- Database of Interacting Protein Structures (DIPS)☆100Updated last year
- ☆106Updated 2 years ago
- Intrinsic-Extrinsic Convolution and Pooling for Learning on 3D Protein Structures☆47Updated 3 years ago
- open source repository☆137Updated last year
- ☆39Updated last year
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆87Updated last year
- Code for our paper "Protein sequence design with a learned potential"☆79Updated last year
- ☆108Updated 2 years ago
- ☆86Updated 2 years ago
- PointSite: a point cloud segmentation tool for identification of protein ligand binding atoms☆56Updated 2 years ago
- A 3D-equivariant neural network for protein structure accuracy estimation☆18Updated 2 years ago
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆94Updated 10 months ago
- Official repository of ReactZyme☆33Updated 7 months ago
- Antibody-Antigen Docking and Affinity Benchmark☆71Updated 4 years ago
- A PyTorch implementation of GCN with mutual attention for protein-protein interaction prediction☆61Updated 3 years ago
- ☆73Updated last year
- ☆130Updated 2 years ago
- ☆52Updated 10 months ago
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆58Updated 11 months ago
- Official implementation of "Generating 3D Molecules for Target Protein Binding" [ICML2022 Long Presentation]☆108Updated last year
- Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.☆86Updated 3 years ago
- Official repository of EnzymeFlow☆92Updated 5 months ago
- Code for Fold2Seq paper from ICML 2021☆50Updated 3 years ago
- Structure-conditioned masked language modeling for protein sequence design☆62Updated last year
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆44Updated 4 months ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆75Updated 11 months ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆59Updated 10 months ago
- An evolutionary context-integrated deep learning framework for protein engineering☆63Updated 3 years ago