csi-greifflab / AbsolutLinks
Unconstrained lattice antibody-antigen bindings generator
☆110Updated 11 months ago
Alternatives and similar repositories for Absolut
Users that are interested in Absolut are comparing it to the libraries listed below
Sorting:
- ☆64Updated 3 years ago
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆125Updated 3 years ago
- Public repository describing training and testing of AntiBERTa.☆59Updated 2 years ago
- Fitness landscapes for antibodies☆73Updated 5 months ago
- ☆58Updated 2 years ago
- Convenience Python APIs for antibody numbering using ANARCI☆96Updated last month
- Protein design and variant prediction using autoregressive generative models☆106Updated last year
- AbLang: A language model for antibodies☆142Updated last year
- Predict the structure of immune receptor proteins☆141Updated 4 months ago
- python tools for TCR:peptide-MHC modeling and analysis☆79Updated last year
- ☆106Updated last year
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆59Updated 4 years ago
- ☆109Updated 11 months ago
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆151Updated last year
- trRosetta for protein design☆179Updated 4 years ago
- Generative Language Modeling for Antibody Design☆151Updated 8 months ago
- Tutorials, cheat sheets, and other resources for computational methods for protein design.☆113Updated last year
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆113Updated 3 months ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆62Updated last year
- Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape☆29Updated 10 months ago
- ☆109Updated 3 years ago
- ☆117Updated 2 years ago
- Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.☆159Updated 2 years ago
- open source code for Tencent tFold☆101Updated 3 months ago
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆100Updated 8 months ago
- Machine learning models for antibody sequences in PyTorch☆39Updated 4 years ago
- Improved antibody structure-based design using inverse folding☆126Updated last month
- Mutation effects predicted from sequence co-variation☆66Updated 7 years ago
- Masif seed paper repository☆154Updated 2 years ago
- Collecting AMP MIC data from different sources, then running a GAN to output promising sequences☆79Updated 10 months ago