Alternatives and similar repositories for unlocking-de-novo-antibody-design

Users that are interested in unlocking-de-novo-antibody-design are comparing it to the libraries listed below

• Graylab / IgLM
  Generative Language Modeling for Antibody Design
  ☆163Updated 11 months ago
• oxpig / AntiFold
  Improved antibody structure-based design using inverse folding
  ☆136Updated 3 weeks ago
• oxpig / AbLang
  AbLang: A language model for antibodies
  ☆147Updated last year
• J-SNACKKB / FLIP
  A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design
  ☆105Updated 11 months ago
• Exscientia / abodybuilder3
  ☆68Updated 10 months ago
• amyxlu / cheap-proteins
  Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…
  ☆138Updated 5 months ago
• jproney / AF2Rank
  ☆112Updated 2 years ago
• martinez-zacharya / TRILL
  Sandbox for Deep-Learning based Computational Protein Design
  ☆116Updated 2 months ago
• programmablebio / pepmlm
  Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling
  ☆91Updated this week
• NREL / EvoProtGrad
  Directed evolution of proteins in sequence space with gradients
  ☆89Updated last year
• HeliXonProtein / binding-ddg-predictor
  open source repository
  ☆141Updated last year
• aqlaboratory / genie
  De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds
  ☆180Updated last year
• WillHua127 / EnzymeFlow
  Official repository of EnzymeFlow
  ☆94Updated 9 months ago
• Graylab / GeoDock
  Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.
  ☆98Updated last year
• fhalab / MLDE
  A machine-learning package for navigating combinatorial protein fitness landscapes.
  ☆129Updated 3 years ago
• debbiemarkslab / SeqDesign
  Protein design and variant prediction using autoregressive generative models
  ☆112Updated last year
• aqlaboratory / rgn2
  ☆107Updated last year
• AstraZeneca / DiffAbXL
  The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…
  ☆84Updated 3 months ago
• ProteinDesignLab / protein_seq_des
  Code for our paper "Protein sequence design with a learned potential"
  ☆79Updated 2 years ago
• RosettaCommons / trRosetta2
  Repository for publicly available deep learning models developed in Rosetta community
  ☆119Updated 4 years ago
• TencentAI4S / IgGM
  Official Implementation of IgGM
  ☆82Updated 3 weeks ago
• OpenProteinAI / PoET
  Inference code for PoET: A generative model of protein families as sequences-of-sequences
  ☆79Updated last year
• OATML-Markslab / Tranception
  Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"
  ☆160Updated 2 years ago
• melobio / EvoPlay
  ☆75Updated 2 years ago
• OATML-Markslab / ProteinNPT
  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
  ☆117Updated 6 months ago
• anton-bushuiev / PPIRef
  Dataset and package for working with protein-protein interactions in 3D
  ☆96Updated 4 months ago
• evo-design / protein-dpo
  Aligning protein generative models with experimental fitness
  ☆105Updated last month
• gjoni / trDesign
  trRosetta for protein design
  ☆182Updated 4 years ago
• ai4protein / VenusREM
  🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)
  ☆100Updated last month
• alchemab / antiberta
  Public repository describing training and testing of AntiBERTa.
  ☆61Updated 2 years ago