AbSciBio / unlocking-de-novo-antibody-design
☆112Updated 5 months ago
Alternatives and similar repositories for unlocking-de-novo-antibody-design:
Users that are interested in unlocking-de-novo-antibody-design are comparing it to the libraries listed below
- Generative Language Modeling for Antibody Design☆135Updated 3 months ago
- Improved antibody structure-based design using inverse folding☆88Updated 2 weeks ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆104Updated last month
- AbLang: A language model for antibodies☆133Updated last year
- ☆97Updated 2 years ago
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆87Updated 6 months ago
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆96Updated 4 months ago
- Code for our paper "Protein sequence design with a learned potential"☆80Updated last year
- Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"☆143Updated last year
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆63Updated 3 months ago
- Predict the structure of immune receptor proteins☆124Updated this week
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆57Updated 9 months ago
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆122Updated 3 years ago
- ☆73Updated 3 months ago
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆118Updated last year
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆68Updated 2 weeks ago
- trRosetta for protein design☆177Updated 3 years ago
- A compilation of deep learning methods for protein design☆95Updated 2 years ago
- open source repository☆131Updated last year
- Aligning protein generative models with experimental fitness☆81Updated 3 months ago
- PINDER: The Protein INteraction Dataset and Evaluation Resource☆98Updated 2 months ago
- Protein design and variant prediction using autoregressive generative models☆95Updated last year
- Official repository of EnzymeFlow☆74Updated last month
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆54Updated last year
- Protein folding in Pymol☆104Updated 2 weeks ago
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆144Updated last year
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆174Updated 9 months ago
- Antibody-Antigen Docking and Affinity Benchmark☆68Updated 4 years ago
- Public repository describing training and testing of AntiBERTa.☆57Updated last year
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆97Updated last month