FelixOpolka / pnerf-pytorchView external linksLinks
🔗 PyTorch implementation of the Parallelized Natural Extension Reference Frame algorithm
☆19Sep 8, 2018Updated 7 years ago
Alternatives and similar repositories for pnerf-pytorch
Users that are interested in pnerf-pytorch are comparing it to the libraries listed below
Sorting:
- ☆36Jul 22, 2019Updated 6 years ago
- Python/TF1 implementation of DeepAccNet (https://www.biorxiv.org/content/10.1101/2020.07.17.209643v1)☆10Sep 2, 2020Updated 5 years ago
- Semantic Segmentor for Protein Structures.☆11Dec 20, 2021Updated 4 years ago
- OpenSMILES parser in Julia☆26Oct 29, 2022Updated 3 years ago
- A simple library for handling NMR data in Julia☆13Jan 27, 2026Updated 2 weeks ago
- Julia tools for reading Crystallographic Information Framework (CIF) files and dictionaries☆15Feb 2, 2026Updated last week
- An efficient method for the conversion from internal to Cartesian coordinates that utilizes the platform-agnostic JAX Python library.☆21Jun 12, 2024Updated last year
- Utilities for working with Mole units for the Julia language☆15Jan 13, 2022Updated 4 years ago
- Extended XYZ read/write support for Julia☆17Dec 3, 2024Updated last year
- spiral engraving effect☆19Jul 16, 2023Updated 2 years ago
- Documentation, guidelines, and policy on contributing to all BioJulia repositories☆17Aug 17, 2023Updated 2 years ago
- PyTorch library of layers acting on protein representations☆119Jun 30, 2024Updated last year
- Deep convolutional networks for fold recognition☆22Nov 8, 2019Updated 6 years ago
- The standalone version of SPOT-1D-Single available for public use for research purposes.☆24May 19, 2024Updated last year
- Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing☆23Aug 5, 2021Updated 4 years ago
- Julia interface to ViennaRNA for RNA structure prediction and analysis☆23Apr 16, 2024Updated last year
- Transferable Double Exponential non-bonded potential for condensed phase simulations of small molecules☆25Feb 4, 2026Updated last week
- Atomic Cluster Expansion for Modelling Invariant Atomic Properties☆22Apr 15, 2025Updated 9 months ago
- A simple Python library to generate model peptides☆95Nov 29, 2020Updated 5 years ago
- Simulation codes shown at the FortranCon 2021☆22Apr 12, 2024Updated last year
- OPUS-Fold: An Open-Source Protein Folding Framework Based on Torsion-Angle Sampling☆21May 4, 2020Updated 5 years ago
- ☆25May 9, 2022Updated 3 years ago
- Use JavaScript Promises syntax in Julia! (alpha)☆26Mar 21, 2025Updated 10 months ago
- Utilities to programmatically query the PubChem database☆28Sep 9, 2025Updated 5 months ago
- BinaryCIF is a data format for storing text based CIF files using a more efficient binary encoding.☆29Oct 14, 2024Updated last year
- PSIPRED Protein Secondary Structure Predictor☆58Jul 3, 2025Updated 7 months ago
- Exercises in avoiding common performance traps with Julia☆28May 15, 2023Updated 2 years ago
- Massively-Parallel Natural Extension of Reference Frame☆33Jan 18, 2023Updated 3 years ago
- ☆21Nov 13, 2023Updated 2 years ago
- pyRMSD is a small Python package that aims to offer an integrative and efficient way of performing RMSD calculations of large sets of str…☆27Aug 20, 2020Updated 5 years ago
- Graph Inference on MoLEcular Topology☆26Mar 25, 2023Updated 2 years ago
- Biological Relationships - Biorels data preparation infrastructure for biology and drug discovery☆14May 19, 2025Updated 8 months ago
- ☆34Jun 29, 2024Updated last year
- quantum dynamics simulation environment☆33Jan 9, 2026Updated last month
- Information sharing portal about nCov/SARS/MERS for drug discovery☆38Oct 8, 2024Updated last year
- A high performance drop-in replacement for Biotite's PDBFile.☆41May 27, 2025Updated 8 months ago
- Home of the public Martini 3 lipid parameters☆18Sep 29, 2025Updated 4 months ago
- OpenMM plugin that implements (an)isotropic polarizable point dipoles and multipoles up to octopoles.☆11Feb 7, 2025Updated last year
- MusicXML in Julia☆14Sep 3, 2024Updated last year