Stack is a single-cell foundation model that enables in-context learning at inference time.
☆133Apr 28, 2026Updated last month
Alternatives and similar repositories for stack
Users that are interested in stack are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PULSAR: a Foundation Model for Multi-scale and Multicellular Biology☆34Mar 1, 2026Updated 3 months ago
- [NeurIPS 2024] "NovoBench: Benchmarking Deep Learning-based \emph{De Novo} Sequencing Methods in Proteomics"☆14Nov 23, 2024Updated last year
- Perturbational analysis by causality-aware generative model for single-cell RNA-sequencing data☆23Dec 16, 2025Updated 5 months ago
- ☆85Jul 18, 2025Updated 10 months ago
- Paper collection about de novo peptide Sequening☆24Feb 5, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆19Nov 12, 2025Updated 6 months ago
- parallel differential expression for single-cell perturbation sequencing☆25Jun 1, 2026Updated last week
- 🏃 The go-to single-cell Foundation Model☆148May 20, 2026Updated 3 weeks ago
- ☆107Aug 26, 2025Updated 9 months ago
- ☆115Aug 18, 2025Updated 9 months ago
- Diffusion Model for Single-Cell Multiome Data Generation and Analysis☆36May 19, 2026Updated 3 weeks ago
- ☆26Jan 10, 2025Updated last year
- ☆13Sep 3, 2025Updated 9 months ago
- ☆413Nov 23, 2025Updated 6 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A versatile single-cell cross-modality translation method via dual-aligned variational autoencoders☆28Jul 1, 2024Updated last year
- ☆173Jan 30, 2026Updated 4 months ago
- Detecting cancer subtypes with machine learning.☆10Feb 5, 2020Updated 6 years ago
- Pan-Cancer Single Cell Classifier☆87May 30, 2024Updated 2 years ago
- ☆18Jul 30, 2022Updated 3 years ago
- Reticulate wrapper for hyperopt☆11Jan 14, 2020Updated 6 years ago
- This repository contains the code developed for the NanOlympicsMod project.☆12Jan 29, 2024Updated 2 years ago
- State is a machine learning model that predicts cellular perturbation response across diverse contexts☆592May 4, 2026Updated last month
- UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations.☆57Feb 18, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- BulkFormer: A large-scale foundation model for human bulk transcriptomes☆62May 26, 2026Updated 2 weeks ago
- LORIS: A LOgistic Regression-based Immunotherapy-response Score☆16Nov 18, 2024Updated last year
- UniGraph2: Learning a Unified Embedding Space to Bind Multimodal Graphs (WWW'25)☆18Apr 22, 2025Updated last year
- PDD: Awesome Phenotypic Drug Discovery☆41Oct 17, 2025Updated 7 months ago
- Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data☆39May 31, 2026Updated last week
- Multi-resolution Variational Inference☆23May 25, 2026Updated 2 weeks ago
- Awesome list about AI4Polymer☆19Jun 2, 2026Updated last week
- Raman2RNA code base.☆16Sep 8, 2023Updated 2 years ago
- Gain biological insights using LLM.☆15Jan 26, 2026Updated 4 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Combinatorial prediction of therapeutic perturbations using causally-inspired neural networks☆127Oct 3, 2025Updated 8 months ago
- Moreno's Sociograms☆13Oct 27, 2022Updated 3 years ago
- Differential quantification of alternative splicing events on spliced pangenome graphs☆16Jan 30, 2026Updated 4 months ago
- Filters for Next Generation Sequencing☆13Oct 31, 2024Updated last year
- ☆40Jun 24, 2025Updated 11 months ago
- ☆23Sep 25, 2025Updated 8 months ago
- ☆10Nov 29, 2022Updated 3 years ago