Alternatives and similar repositories for TranSiGen

Users that are interested in TranSiGen are comparing it to the libraries listed below

• TencentAILabHealthcare / ER-BERT
  ☆11Updated last year
• pengxingang / TEIM
  TEIM: TCR-Epitope Interaction Modeling
  ☆51Updated 2 years ago
• mims-harvard / PINNACLE
  Contextual AI models for single-cell protein biology
  ☆88Updated 6 months ago
• bm2-lab / PanPep
  ☆50Updated last year
• Perturbation-Response-Prediction / PRnet
  PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturb…
  ☆56Updated 8 months ago
• Blair1213 / TREE
  [NBME] Interpretable identification of cancer genes across biological networks via transformer-powered graph representation learning
  ☆21Updated 5 months ago
• jianglikun / DeepTTC
  DeepTTC: a transformer-based model for predicting cancer drug response
  ☆16Updated 2 years ago
• pth1993 / DeepCE
  A deep learning framework for high-throughput mechanism-driven phenotype screening
  ☆50Updated 4 years ago
• peizhenbai / DrugBAN
  Interpretable bilinear attention network with domain adaptation improves drug-target prediction.
  ☆126Updated 2 years ago
• JieZheng-ShanghaiTech / KG4SL
  Synthetic lethality (SL) is a promising gold mine for the discovery of anti-cancer drug targets. KG4SL is the first graph neural network …
  ☆34Updated 2 years ago
• bsml320 / VAEN
  A deep generative neural network based approach to impute drug response
  ☆21Updated 4 years ago
• theislab / IMPA
  ☆15Updated 7 months ago
• a96123155 / TransPHLA-AOMP
  ☆47Updated 3 years ago
• YAndrewL / CLAPE
  contrastive learning and pre-trained encoder for protein-ligand binding sites prediction
  ☆30Updated last month
• TencentAILabHealthcare / DeepAIR
  ☆36Updated 2 years ago
• MaayanLab / L1000toRNAseq
  ☆18Updated 3 years ago
• YihePang / DisoFLAG
  Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model
  ☆22Updated last year
• astrazeneca-cgr-publications / DrugnomeAI-release
  ☆17Updated 11 months ago
• CatIIIIIIII / RNAErnie
  Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"
  ☆49Updated 10 months ago
• theislab / chemCPA
  Code for "Predicting Cellular Responses to Novel Drug Perturbations at a Single-Cell Resolution", NeurIPS 2022.
  ☆123Updated 6 months ago
• bio-ontology-research-group / deepgo2
  ☆44Updated 11 months ago
• genbio-ai / ModelGenerator
  AIDO.ModelGenerator is a software stack powering the development of an AI-driven Digital Organism (AIDO) by enabling researchers to adapt…
  ☆92Updated last week
• zqgao22 / HIGH-PPI
  ☆88Updated 2 years ago
• violet-sto / TGSA
  PyTorch implementation of "TGSA: Protein-Protein Association-Based Twin Graph Neural Networks for Drug Response Prediction with Similarit…
  ☆24Updated 3 years ago
• duolinwang / S-PLM
  S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure
  ☆69Updated 2 months ago
• piercelab / tcrmodel2
  ☆41Updated 5 months ago
• sinc-lab / lncRNA-folding
  ☆18Updated last year
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆60Updated last year
• a96123155 / UTR-LM
  ☆90Updated 10 months ago
• samsledje / D-SCRIPT
  A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions
  ☆102Updated 2 weeks ago