☆35Jan 21, 2025Updated last year
Alternatives and similar repositories for TranSiGen
Users that are interested in TranSiGen are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A benchmark on predicting how small molecules change gene expression in different cell types.☆18Jul 4, 2025Updated 10 months ago
- Code for paper: "Removing Biases from Molecular Representations via Information Maximization"☆21Apr 4, 2024Updated 2 years ago
- A deep learning framework for high-throughput mechanism-driven phenotype screening☆55Mar 27, 2021Updated 5 years ago
- ☆38Oct 8, 2021Updated 4 years ago
- A Deep Learning based Efficacy Prediction System for drug discovery☆75Nov 22, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- L1000 peak deconvolution based on Bayesian analysis☆28Oct 10, 2021Updated 4 years ago
- Python package to load and query ARCHS4 data☆28Jul 25, 2025Updated 9 months ago
- Functional Embedding of Gene Signatures☆48Feb 29, 2024Updated 2 years ago
- codes for KPGT (Knowledge-guided Pre-training of Graph Transformer)☆122Sep 17, 2024Updated last year
- PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturb…☆78Dec 13, 2024Updated last year
- ☆23Oct 6, 2022Updated 3 years ago
- Code for TNNLS paper "Beyond Homophily and Homogeneity Assumption: Relation-based Frequency Adaptive Graph Neural Networks"☆14Feb 27, 2024Updated 2 years ago
- This repository implements the winning solution for the single cell perturbation problems☆16Dec 22, 2023Updated 2 years ago
- ☆98Apr 25, 2026Updated last week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Cross-modal generation of molecules from gene expression inputs. (Briefings in Bioinformatics 2024)☆11May 3, 2025Updated last year
- Code for "Predicting Cellular Responses to Novel Drug Perturbations at a Single-Cell Resolution", NeurIPS 2022.☆149Feb 6, 2025Updated last year
- Awesome-AI-Meets-Biology is a collection of state-of-the-art, novel, exciting LLMs and agents on biomedical and bioinformatic fields.☆30Dec 26, 2025Updated 4 months ago
- neuropeptide prediction☆13Sep 2, 2022Updated 3 years ago
- 该存储库,主要存放根据自己所掌握的NGS差异表达分析技术方法为主,具体的实验以及方案设计等将不会存放在此存储库。☆15May 19, 2020Updated 5 years ago
- A python package for computer-aid drug design.☆43Nov 21, 2025Updated 5 months ago
- ☆12Aug 28, 2020Updated 5 years ago
- UCE is a zero-shot foundation model for single-cell gene expression data☆254Feb 26, 2026Updated 2 months ago
- An improved method for predicting toxicity of the peptides and designing of non-toxic peptides☆29Apr 29, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆26Jan 10, 2025Updated last year
- BulkFormer: A large-scale foundation model for human bulk transcriptomes☆57Dec 14, 2025Updated 4 months ago
- UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations.☆55Feb 18, 2026Updated 2 months ago
- ☆14Jun 22, 2022Updated 3 years ago
- ☆408Nov 23, 2025Updated 5 months ago
- ☆16Jul 27, 2021Updated 4 years ago
- SSGCN☆11Jul 23, 2020Updated 5 years ago
- Official implementation for ActFound (Nature Machine Intelligence): A bioactivity foundation model using pairwise meta-learning☆45Oct 28, 2024Updated last year
- Similarity search in heterogeneous knowledge graphs using meta paths.☆30Mar 11, 2023Updated 3 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆10Oct 30, 2018Updated 7 years ago
- A Molecular Video-derived Foundation Model for Scientific Drug Discovery (Nature Communications 2024)☆24Dec 24, 2024Updated last year
- ☆45Apr 4, 2026Updated last month
- ☆23Jul 27, 2021Updated 4 years ago
- Library of Integrated Cellular Signatures L1000☆31Apr 21, 2022Updated 4 years ago
- CLUMPS adapted to post-translational modifications.☆10May 22, 2025Updated 11 months ago
- Source code for TKDE'22 "KG-MTL: Knowledge Graph Enhanced Multi-Task Learning for Molecular Interaction"☆28Jul 9, 2022Updated 3 years ago