Alternatives and similar repositories for Awesome-Phenotypic-Drug-Discovery:

Users that are interested in Awesome-Phenotypic-Drug-Discovery are comparing it to the libraries listed below

• OmicsML / CellPLM
  Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.
  ☆77Updated 10 months ago
• QSong-github / SiGra
  Single-cell spatial elucidation through image-augmented graph transformer
  ☆31Updated last year
• vandijklab / cell2sentence-ft
  Cell2Sentence turns scRNA-seq data into text for LLM training.
  ☆84Updated 5 months ago
• microsoft / zero-shot-scfoundation
  ☆56Updated 5 months ago
• jsxlei / scCLIP
  ☆27Updated last year
• bowang-lab / BLEEP
  Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning
  ☆69Updated 4 months ago
• theislab / nicheformer
  Repository for Nicheformer: a foundation model for single-cell and spatial omics
  ☆80Updated last month
• recursionpharma / maes_microscopy
  Official repo for Recursion's accepted spotlight paper at NeurIPS 2023 Generative AI & Biology workshop.
  ☆53Updated 3 months ago
• JinmiaoChenLab / SpatialGlue
  SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.
  ☆48Updated 7 months ago
• HakimBenkirane / CustOmics
  A deep-learning framework for multi-omics integration
  ☆24Updated last year
• Liu-Hy / GenoTex
  ☆14Updated 7 months ago
• JiawenChenn / STimage-1K4M
  ☆53Updated last week
• biomed-AI / Hist2ST
  ☆35Updated 2 years ago
• carpenter-singh-lab / 2023_Arevalo_NatComm_BatchCorrection
  Evaluating batch correction methods for image-based cell profiling
  ☆11Updated last month
• HelloWorldLTY / MuSe-GNN
  [NeurIPS 2023] Official codes of "MuSe-GNN: Learning Unified Gene Representation From Multimodal Biological Graph Data"
  ☆27Updated 8 months ago
• JiangBioLab / DeepST
  Identify spatial domain
  ☆65Updated last year
• vandijklab / cell2sentence
  Cell2Sentence: Teaching Large Language Models the Language of Biology
  ☆39Updated 2 months ago
• jump-cellpainting / 2024_Chandrasekaran_NatureMethods
  ☆59Updated last week
• EperLuo / scDiffusion
  A model developed for the generation of scRNA-seq data
  ☆48Updated 2 weeks ago
• caokai1073 / uniPort
  a unified single-cell data integration framework by optimal transport
  ☆34Updated 4 months ago
• OmicsML / scDiff
  scDiff: A General Single-Cell Analysis Framework via Conditional Diffusion Generative Models
  ☆26Updated 6 months ago
• theislab / IMPA
  ☆12Updated last month
• aristoteleo / awesome-bioagent-papers
  Agent self-driven repository on bio-agent papers, i.e. papers on LLM-based agents in biology and medicine.
  ☆21Updated this week
• mahmoodlab / MAPS
  Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications
  ☆50Updated 11 months ago
• mims-harvard / PINNACLE
  Contextual AI models for single-cell protein biology
  ☆79Updated last week
• TencentAILabHealthcare / scPROTEIN
  ☆48Updated 2 months ago
• yrjia1015 / THItoGene
  Code for the THItoGene
  ☆17Updated 8 months ago
• almaan / her2st
  Her2 Breast Cancer Project
  ☆63Updated 2 years ago
• ruiyi-zhang / scPretrain
  scPretrain: Multi-task self-supervised learning for cell type classification
  ☆23Updated 3 years ago
• jimmylihui / GenBench
  ☆20Updated this week