Diffusion Model for Single-Cell Multiome Data Generation and Analysis
☆33Feb 5, 2026Updated 2 months ago
Alternatives and similar repositories for scDiffusion-X
Users that are interested in scDiffusion-X are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pytorch implementation of EpiFoundation☆26Feb 25, 2025Updated last year
- A model developed for the generation of scRNA-seq data☆90Jan 21, 2026Updated 3 months ago
- ☆18Apr 7, 2025Updated last year
- ☆62Apr 5, 2024Updated 2 years ago
- ☆19Jul 10, 2025Updated 9 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A versatile single-cell cross-modality translation method via dual-aligned variational autoencoders☆28Jul 1, 2024Updated last year
- X-Cell: a diffusion language model for genome-scale perturbation prediction☆79Mar 16, 2026Updated last month
- [ICML'25] The Price of Freedom: Exploring Expressivity and Runtime Tradeoffs in Equivariant Tensor Products☆19Jul 16, 2025Updated 9 months ago
- A foundation model for single-cell epigenomic data☆63Jan 6, 2026Updated 3 months ago
- ChatCell: Facilitating Single-Cell Analysis with Natural Language☆52Jun 5, 2025Updated 10 months ago
- Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.☆61May 30, 2024Updated last year
- ☆16Jun 27, 2025Updated 10 months ago
- SIP: Significant Interaction Peak caller☆17Apr 24, 2025Updated last year
- [NPJ AI] A foundation model for individual genome modelling☆25Apr 10, 2026Updated 3 weeks ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- A curated list of LLM powered AI Agents in Biomedical Research. Medical Image Analysis, Multi-omics Genomics Analysis, Biomedical Scienti…☆74Sep 28, 2025Updated 7 months ago
- UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations.☆55Feb 18, 2026Updated 2 months ago
- ☆23Jan 20, 2021Updated 5 years ago
- SPACE: STRING proteins as complementary embeddings☆39Apr 10, 2026Updated 3 weeks ago
- R package for transfer learning of single-cell RNA-seq denoising☆31Jun 14, 2022Updated 3 years ago
- ☆16Jun 8, 2023Updated 2 years ago
- Public Codebase supporting the paper "Modeling Cellular Perturbations with The Sparse Additive Mechanism Shift Variational Autoencoder" b…☆14Oct 20, 2023Updated 2 years ago
- Stack is a single-cell foundation model that enables in-context learning at inference time.☆124Updated this week
- ☆15Dec 18, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Modeling complex perturbations with CellFlow☆137Updated this week
- ☆161Jan 30, 2026Updated 3 months ago
- PULSAR: a Foundation Model for Multi-scale and Multicellular Biology☆33Mar 1, 2026Updated 2 months ago
- UniGraph2: Learning a Unified Embedding Space to Bind Multimodal Graphs (WWW'25)☆18Apr 22, 2025Updated last year
- PECA is a software for inferring context specific gene regulatory network from paired gene expression and chromatin accessibility data☆45Oct 7, 2025Updated 6 months ago
- SIMBA: SIngle-cell eMBedding Along with features☆20Jan 6, 2026Updated 3 months ago
- Connectivity-contrastive learning (CCL)☆11Feb 16, 2023Updated 3 years ago
- [NeurIPS 2024] "NovoBench: Benchmarking Deep Learning-based \emph{De Novo} Sequencing Methods in Proteomics"☆13Nov 23, 2024Updated last year
- ☆12Jun 16, 2025Updated 10 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Scripts and notebooks used in Akgol Oksuz et al. paper☆11Jan 18, 2021Updated 5 years ago
- ☆15Jun 27, 2025Updated 10 months ago
- Nextflow pipeline for cross-species integration and assessment of single cell RNA-seq datasets☆43Jul 20, 2025Updated 9 months ago
- Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data☆38Nov 28, 2025Updated 5 months ago
- ☆10Nov 29, 2022Updated 3 years ago
- Transposable element expression at unique loci in single cells with CELLO-seq☆11Jun 17, 2024Updated last year
- [NeurIPS 2024 Spotlight] A cell-ontology guided transcriptome foundation model☆22Mar 12, 2025Updated last year