COSMOS is a computational tool crafted to overcome the challenges associated with integrating spatially resolved multi-omics data. This software harnesses a graph neural network algorithm to deliver cutting-edge solutions for analyzing biological data that encompasses various omics types within a spatial framework.
☆14Nov 12, 2024Updated last year
Alternatives and similar repositories for COSMOS
Users that are interested in COSMOS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆15Nov 1, 2025Updated 8 months ago
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆92Jun 24, 2024Updated 2 years ago
- ☆18Jan 28, 2026Updated 5 months ago
- ☆11Feb 16, 2025Updated last year
- Multimodal Compact Bilinear Pooling class in Python☆12Sep 17, 2019Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Weighted Nearest Neighbors Analysis implemented in Python (pyWNN)☆21Oct 7, 2021Updated 4 years ago
- [AAAI 2025] M2OST: Many-to-one Regression for Predicting Spatial Transcriptomics from Digital Pathology Images☆14Dec 1, 2025Updated 7 months ago
- [NeurIPS 2025] Implementation for the paper "Modeling Microenvironment Trajectories on Spatial Transcriptomics with NicheFlow"☆25Nov 4, 2025Updated 8 months ago
- ☆35Jan 17, 2025Updated last year
- A novel spatial multi-modal omics framework, named PRototype-Aware Graph Adaptative aggregation (PRAGA) for spatial multi-modal omics ana…☆20May 29, 2025Updated last year
- Multi-task benchmarking of single-cell multimodal omics integration methods☆26Jun 8, 2026Updated last month
- Dependency-aware deep generative models for multitasking analysis of spatial genomics data☆47Jul 10, 2024Updated 2 years ago
- 支持多种图表类型的绘制工具，包括思维导图、流程图、数据可视化图表、数学函数图等；可根据用户需求生成 Mermaid、ECharts、Mindmap、DrawIO、GeoGebra 等格式的图表，并导出为 PNG、SVG、HTML 等格式☆17Jan 26, 2026Updated 5 months ago
- A deep model infers gene regulation networks from scRNA-seq data.☆12Jul 1, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- This repo shows the source code of EMNLP 2022 paper: Learning Inter-Entity Interaction for Few-Shot Knowledge Graph Completion.☆13Apr 23, 2023Updated 3 years ago
- 随便写写☆17Oct 10, 2024Updated last year
- a simple R data package for curated cancer pathway-specific gene lists☆13Mar 31, 2020Updated 6 years ago
- Radar Software Toolkit (RST)☆27Updated this week
- a variational autoencoder method for clustering single-cell mutation data☆11Apr 17, 2024Updated 2 years ago
- ☆10Nov 6, 2023Updated 2 years ago
- ☆19Aug 3, 2025Updated 11 months ago
- ☆15Feb 19, 2024Updated 2 years ago
- 疫情背景下，基于情感词典和机器学习对新闻和微博评论的情感分析☆33Mar 6, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Detecting and dissecting anomalous anatomic regions in spatial transcriptomics with STANDS☆11May 18, 2026Updated 2 months ago
- Lung cancer 10X analysis☆11Dec 30, 2020Updated 5 years ago
- ☆11Jan 12, 2024Updated 2 years ago
- ☆68Apr 22, 2026Updated 3 months ago
- ☆15Jul 9, 2025Updated last year
- 图神经网络课程——图注意力网络☆11Dec 28, 2019Updated 6 years ago
- TCR Reconstruction Algorithm for Paired-End Single cell☆14Oct 13, 2019Updated 6 years ago
- IdeaNote是一款基于WEB的Markdown笔记应用，支持在多个电脑间笔记数据快速分片同步，可拖拽树形目录管理，自动文档大纲生成，目录顺序调整等功能。☆36Feb 7, 2021Updated 5 years ago
- Deep fusion of spatial transcriptomics and histology images for interpretable high-definition embedding mapping☆18May 26, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆162Mar 19, 2024Updated 2 years ago
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆53Apr 8, 2024Updated 2 years ago
- DECODE☆49Apr 3, 2026Updated 3 months ago
- Wave2vec 2.0 Recognize pipeline☆33Dec 22, 2020Updated 5 years ago
- 无☆28Nov 4, 2022Updated 3 years ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆16Jul 5, 2023Updated 3 years ago
- ☆13May 12, 2023Updated 3 years ago