AllenInstitute / ecephys_spike_sorting
Modules for processing extracellular electrophysiology data from Neuropixels probes
☆114Updated 7 months ago
Alternatives and similar repositories for ecephys_spike_sorting:
Users that are interested in ecephys_spike_sorting are comparing it to the libraries listed below
- cortex lab code for electrophysiology☆81Updated last year
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆119Updated 2 months ago
- SpikeGLX recording system GUI [Neuropixels NI]☆87Updated this week
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆59Updated last month
- Archived code for reading data saved by the Open Ephys GUI☆60Updated 2 years ago
- Tutorials for using SpikeInterface on extracellular datasets.☆62Updated last year
- GPU code for spike sorting☆181Updated last year
- Utilities for managing Neuropixel datasets and Kilosort results☆46Updated last year
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 6 months ago
- Python package to handle probe layout, geometry and wiring to device.☆61Updated last month
- Code for internal lab sharing - polishing has started but is by no means complete☆126Updated last year
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆56Updated last week
- A curated list of awesome Neuropixels resources.☆97Updated 2 months ago
- WIP: Python port of Kilosort2☆50Updated last year
- Code accompanying Steinmetz et al., 2019☆59Updated 3 years ago
- Tools to work with Allen Inst CCF data in matlab☆131Updated last year
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year
- A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.☆14Updated 6 years ago
- Python code implementing the ZETA-test☆26Updated 2 weeks ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆100Updated 4 months ago
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆22Updated 2 weeks ago
- Neuroelectrophysiology object model and data analysis in Python.☆51Updated 3 weeks ago
- A Matlab interface for reading and writing NWB files☆52Updated last week
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Updated 3 years ago
- Fast and scalable spike sorting in python☆89Updated last year
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆25Updated last month
- MountainSort spike sorting algorithm, version 5☆43Updated last week
- pyqt5 dependent applications for IBL sessions☆26Updated last month
- miniscope analysis pipeline with interactive visualizations☆92Updated 8 months ago
- NEural MOdelS, a statistical modeling framework for neuroscience.☆95Updated this week