AllenInstitute / ecephys_spike_sorting
Modules for processing extracellular electrophysiology data from Neuropixels probes
☆113Updated 7 months ago
Alternatives and similar repositories for ecephys_spike_sorting:
Users that are interested in ecephys_spike_sorting are comparing it to the libraries listed below
- cortex lab code for electrophysiology☆79Updated last year
- GPU code for spike sorting☆181Updated last year
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆117Updated last month
- SpikeGLX recording system GUI [Neuropixels NI]☆86Updated this week
- A curated list of awesome Neuropixels resources.☆94Updated last month
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 6 months ago
- Tutorials for using SpikeInterface on extracellular datasets.☆62Updated last year
- Archived code for reading data saved by the Open Ephys GUI☆60Updated last year
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆59Updated 3 weeks ago
- Utilities for managing Neuropixel datasets and Kilosort results☆46Updated last year
- Python package to handle probe layout, geometry and wiring to device.☆60Updated last week
- WIP: Python port of Kilosort2☆50Updated last year
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Updated 3 years ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆54Updated 3 weeks ago
- Information about Neuropixels electrode arrays☆86Updated 3 months ago
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆21Updated 3 weeks ago
- Code for internal lab sharing - polishing has started but is by no means complete☆125Updated last year
- Fast and scalable spike sorting in python☆89Updated last year
- Python code implementing the ZETA-test☆25Updated 6 months ago
- MountainSort spike sorting algorithm, version 5☆43Updated 2 weeks ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆97Updated 3 months ago
- miniscope analysis pipeline with interactive visualizations☆92Updated 8 months ago
- pyqt5 dependent applications for IBL sessions☆26Updated last week
- NEural MOdelS, a statistical modeling framework for neuroscience.☆92Updated last week
- A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.☆14Updated 6 years ago
- A Matlab interface for reading and writing NWB files☆51Updated this week
- pynapple collaborative data analysis (high level python scripts)☆37Updated 11 months ago
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆25Updated last week
- "Approaches to Study Neural Circuits" course☆65Updated 3 months ago
- Tools to work with Allen Inst CCF data in matlab☆130Updated last year