LorenFrankLab / spyglassLinks
Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
☆102Updated last week
Alternatives and similar repositories for spyglass
Users that are interested in spyglass are comparing it to the libraries listed below
Sorting:
- NEural MOdelS, a statistical modeling framework for neuroscience.☆102Updated last week
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆62Updated this week
- OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…☆71Updated last month
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆128Updated last month
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆66Updated this week
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year
- IBL core shared libraries☆63Updated this week
- Browser-based NWB visualization and DANDI exploration☆59Updated this week
- Neuroelectrophysiology object model and data analysis in Python.☆50Updated 3 weeks ago
- Web app for viewing results of ephys spike sorting☆26Updated 2 weeks ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆105Updated 8 months ago
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- Python package to handle probe layout, geometry and wiring to device.☆69Updated 2 weeks ago
- "Approaches to Study Neural Circuits" course☆66Updated 8 months ago
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Updated 3 years ago
- Region Of Interest Classification and Tracking☆24Updated last week
- a visualization method for neural data☆235Updated 4 months ago
- Visualization of electrophysiological data from Elephant☆24Updated 10 months ago
- ☆52Updated last year
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year
- Code for Functional Mixed Models for Fiber Photometry☆13Updated last month
- Machine Learning Methods for Neural Data Analysis☆19Updated 3 months ago
- Algorithm for automated source extraction from 1P data☆21Updated 2 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆151Updated 2 weeks ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆174Updated last month
- Tutorials for using SpikeInterface on extracellular datasets.☆66Updated last year
- A gui for browsing joint calcium imaging + behavioral data.☆53Updated 7 months ago
- Functions to assess quality of spike sorting results☆34Updated last year
- Tools for identifying sharp wave ripple events using LFPs☆38Updated 10 months ago