LorenFrankLab / spyglassLinks
Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
☆107Updated this week
Alternatives and similar repositories for spyglass
Users that are interested in spyglass are comparing it to the libraries listed below
Sorting:
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆71Updated last week
- NEural MOdelS, a statistical modeling framework for neuroscience.☆116Updated last week
- Browser-based NWB visualization and DANDI exploration☆62Updated last month
- OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…☆74Updated 6 months ago
- IBL core shared libraries☆66Updated last week
- Web app for viewing results of ephys spike sorting☆27Updated 4 months ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆139Updated last month
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆73Updated this week
- "Approaches to Study Neural Circuits" course☆65Updated last year
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Updated 4 years ago
- A open toolbox of several machine learning approaches for sharp-wave ripple detection☆32Updated this week
- Python package to handle probe layout, geometry and wiring to device.☆76Updated last week
- Visualization of electrophysiological data from Elephant☆24Updated last year
- Neuroelectrophysiology object model and data analysis in Python.☆50Updated 5 months ago
- pynapple collaborative data analysis (high level python scripts)☆38Updated last month
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆111Updated 3 months ago
- a visualization method for neural data☆241Updated 9 months ago
- ☆52Updated last year
- PYthon Neural Analysis Package☆343Updated this week
- Region Of Interest Classification and Tracking☆27Updated last week
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆80Updated 9 months ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆181Updated 5 months ago
- pyqt5 dependent applications for IBL sessions☆32Updated 3 months ago
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆43Updated 10 months ago
- Code for Functional Mixed Models for Fiber Photometry☆13Updated 5 months ago
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆28Updated last month
- UnitRefine is a machine-learning toolbox that simplifies spike sorting curation by reducing manual curation.☆65Updated 2 weeks ago
- Fast and scalable spike sorting in python☆95Updated 5 months ago
- Tools for identifying sharp wave ripple events using LFPs☆40Updated 3 months ago