LorenFrankLab / spyglass
Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
☆96Updated this week
Alternatives and similar repositories for spyglass:
Users that are interested in spyglass are comparing it to the libraries listed below
- NEural MOdelS, a statistical modeling framework for neuroscience.☆91Updated this week
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆54Updated this week
- OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…☆64Updated last week
- ☆52Updated 6 months ago
- WIP: Python port of Kilosort2☆50Updated last year
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆52Updated this week
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 5 months ago
- IBL core shared libraries☆62Updated this week
- Web app for viewing results of ephys spike sorting☆25Updated 2 weeks ago
- Browser-based NWB visualization and DANDI exploration☆53Updated this week
- pynapple collaborative data analysis (high level python scripts)☆37Updated 11 months ago
- pyqt5 dependent applications for IBL sessions☆25Updated this week
- A curated list of awesome Neuropixels resources.☆89Updated 3 weeks ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆114Updated last month
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Updated 3 years ago
- "Approaches to Study Neural Circuits" course☆65Updated 2 months ago
- Open Neurophysiology Environment☆18Updated this week
- Neuroelectrophysiology object model and data analysis in Python.☆50Updated 3 months ago
- Python package to handle probe layout, geometry and wiring to device.☆56Updated 3 weeks ago
- ☆22Updated 4 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- Visualization of electrophysiological data from Elephant☆22Updated 4 months ago
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆25Updated 8 months ago
- CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.☆11Updated last year
- Archived code for reading data saved by the Open Ephys GUI☆59Updated last year
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆45Updated 4 months ago
- A gui for browsing joint calcium imaging + behavioral data.☆51Updated last month
- Shareable, interactive scientific figures in the cloud☆35Updated 3 months ago
- ☆49Updated 2 years ago
- Functions to assess quality of spike sorting results☆32Updated last year