OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁🧠🔬🖥️📈
☆75Jul 13, 2026Updated last week
Alternatives and similar repositories for openscope_databook
Users that are interested in openscope_databook are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- analysis tools for large-scale neural recordings☆17Apr 4, 2025Updated last year
- Machine Learning Methods for Neural Data Analysis☆22May 16, 2025Updated last year
- NEural MOdelS, a statistical modeling framework for neuroscience.☆141Updated this week
- Python TIFF Stack Reader for ScanImage 5 scans (including multiROI).☆13May 2, 2022Updated 4 years ago
- AIND pipeline for processing extracellular electrophysiology data☆38Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- IBL core shared libraries☆68Updated this week
- A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and di…☆35Oct 6, 2023Updated 2 years ago
- PYthon Neural Analysis Package☆376Updated this week
- Package for the data-driven representation of non-linear dynamics over manifolds based on a statistical distribution of local phase portr…☆109Jul 31, 2025Updated 11 months ago
- ☆64Sep 5, 2022Updated 3 years ago
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆118Updated this week
- ☆12Nov 7, 2019Updated 6 years ago
- IaC codebase for the NeuroCAAS Platform☆40Dec 15, 2023Updated 2 years ago
- A python package for simulating movement and spatial cell types (e.g. place cells, grid cells) in continuous environments.☆264Jul 9, 2026Updated last week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Tools, algorithms, and frameworks for managing and analyzing neural data.☆21Mar 21, 2022Updated 4 years ago
- Python package to handle probe layout, geometry and wiring to device.☆83Jul 9, 2026Updated last week
- pynapple collaborative data analysis (high level python scripts)☆39Dec 4, 2025Updated 7 months ago
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆46Mar 18, 2025Updated last year
- Learnable latent embeddings for joint behavioral and neural analysis - Official implementation of CEBRA☆1,100Jun 28, 2026Updated 3 weeks ago
- Fitting low-rank RNNs to neural trajectories (LINT method).☆19Mar 19, 2025Updated last year
- A open toolbox of several machine learning approaches for sharp-wave ripple detection☆36Jan 15, 2026Updated 6 months ago
- The framework for inferring Langevin dynamics from spike data☆52May 31, 2026Updated last month
- The Freely Moving Animal (FMA) Toolbox is a Matlab toolbox. Its purpose is to help analyze electrophysiological and behavioral data recor…☆15Aug 27, 2021Updated 4 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Convert Intan (rhd or rhs) files to NWB file format☆10Oct 2, 2023Updated 2 years ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆79Updated this week
- ☆224Jun 3, 2024Updated 2 years ago
- Analysis for spatially modulated spiking activity, e.g. place cells, grid cells☆22Feb 17, 2026Updated 5 months ago
- Package for removing motion artifacts from two-channel imaging☆11Aug 29, 2023Updated 2 years ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆49Sep 27, 2019Updated 6 years ago
- Coding exercises for Neural Data Science at CSHL in 2019☆31May 9, 2020Updated 6 years ago
- Code implements the LN model used to describe spike trains of MEC neurons based on the animal's position, head direction, speed, and thet…☆23Jun 20, 2022Updated 4 years ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆28Dec 21, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- CEBRA Demo Notebooks. Please see all of them at the URL below:☆15Jun 30, 2025Updated last year
- DataJoint Element for behavioral analysis with DeepLabCut☆13May 20, 2025Updated last year
- Demixed Shared Component Analysis☆13Oct 22, 2020Updated 5 years ago
- Shareable, interactive scientific figures in the cloud☆38Sep 4, 2025Updated 10 months ago
- Code for neural and behavioral data analysis from the Brain Computation and Behavior Lab, aka AyA Lab, at Cornell University.☆25May 29, 2026Updated last month
- Multi-dataset benchmark for neural decode algorithms.☆17Mar 20, 2023Updated 3 years ago
- Open Ephys plugins for tracking experiments☆10May 5, 2020Updated 6 years ago