OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience ππ§ π¬π₯οΈπ
β74Mar 13, 2026Updated last week
Alternatives and similar repositories for openscope_databook
Users that are interested in openscope_databook are comparing it to the libraries listed below
Sorting:
- NEural MOdelS, a statistical modeling framework for neuroscience.β128Mar 14, 2026Updated last week
- Machine Learning Methods for Neural Data Analysisβ20May 16, 2025Updated 10 months ago
- Python TIFF Stack Reader for ScanImage 5 scans (including multiROI).β13May 2, 2022Updated 3 years ago
- IBL core shared librariesβ67Mar 10, 2026Updated last week
- A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and diβ¦β33Oct 6, 2023Updated 2 years ago
- PYthon Neural Analysis Packageβ362Mar 7, 2026Updated 2 weeks ago
- analysis tools for large-scale neural recordingsβ17Apr 4, 2025Updated 11 months ago
- Package for the data-driven representation of non-linear dynamics over manifolds based on a statistical distribution of local phase portrβ¦β102Jul 31, 2025Updated 7 months ago
- β61Sep 5, 2022Updated 3 years ago
- β13Nov 7, 2019Updated 6 years ago
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSFβ111Updated this week
- Fast optimisation of tuning curves by iterative refitting and decodingβ14Updated this week
- IaC codebase for the NeuroCAAS Platformβ40Dec 15, 2023Updated 2 years ago
- Tools, algorithms, and frameworks for managing and analyzing neural data.β20Mar 21, 2022Updated 4 years ago
- Python package to handle probe layout, geometry and wiring to device.β79Updated this week
- Multichannel time series lossless compression in pure Python based on NumPy and zlibβ45Mar 18, 2025Updated last year
- pynapple collaborative data analysis (high level python scripts)β39Dec 4, 2025Updated 3 months ago
- Fitting low-rank RNNs to neural trajectories (LINT method).β18Mar 19, 2025Updated last year
- Learnable latent embeddings for joint behavioral and neural analysis - Official implementation of CEBRAβ1,078Feb 2, 2026Updated last month
- The Freely Moving Animal (FMA) Toolbox is a Matlab toolbox. Its purpose is to help analyze electrophysiological and behavioral data recorβ¦β15Aug 27, 2021Updated 4 years ago
- A open toolbox of several machine learning approaches for sharp-wave ripple detectionβ33Jan 15, 2026Updated 2 months ago
- The framework for inferring Langevin dynamics from spike dataβ50Feb 23, 2026Updated 3 weeks ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.β74Updated this week
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.β27Dec 21, 2023Updated 2 years ago
- β221Jun 3, 2024Updated last year
- UnitRefine is a machine-learning toolbox that simplifies spike sorting curation by reducing manual curation.β73Mar 8, 2026Updated 2 weeks ago
- A python package for simulating movement and spatial cell types (e.g. place cells, grid cells) in continuous environments.β252Jan 8, 2026Updated 2 months ago
- Analysis for spatially modulated spiking activity, e.g. place cells, grid cellsβ22Feb 17, 2026Updated last month
- Convert Intan (rhd or rhs) files to NWB file formatβ10Oct 2, 2023Updated 2 years ago
- Package for removing motion artifacts from two-channel imagingβ11Aug 29, 2023Updated 2 years ago
- Shareable, interactive scientific figures in the cloudβ38Sep 4, 2025Updated 6 months ago
- Coding exercises for Neural Data Science at CSHL in 2019β31May 9, 2020Updated 5 years ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)β47Sep 27, 2019Updated 6 years ago
- AIND pipeline for processing extracellular electrophysiology dataβ32Mar 13, 2026Updated last week
- CEBRA Demo Notebooks. Please see all of them at the URL below:β15Jun 30, 2025Updated 8 months ago
- Demixed Shared Component Analysisβ13Oct 22, 2020Updated 5 years ago
- DataJoint Element for behavioral analysis with DeepLabCutβ13May 20, 2025Updated 10 months ago
- Neuropixels case for chronic recordings in freely moving mice.β19Dec 3, 2019Updated 6 years ago
- pyPhotometry code, GUI and micropython firmwareβ15Nov 17, 2025Updated 4 months ago