AllenInstitute / openscope_databookLinks
OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience ππ§ π¬π₯οΈπ
β71Updated 2 months ago
Alternatives and similar repositories for openscope_databook
Users that are interested in openscope_databook are comparing it to the libraries listed below
Sorting:
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSFβ103Updated this week
- NEural MOdelS, a statistical modeling framework for neuroscience.β103Updated this week
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.β63Updated this week
- Calibrated inference of spiking from calcium ΞF/F data using deep networksβ151Updated 3 weeks ago
- a visualization method for neural dataβ236Updated 5 months ago
- pynapple collaborative data analysis (high level python scripts)β37Updated last year
- A open toolbox of several machine learning approaches for sharp-wave ripple detectionβ30Updated last year
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of aβ¦β131Updated 2 months ago
- A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and diβ¦β28Updated last year
- β58Updated 3 years ago
- Region Of Interest Classification and Trackingβ25Updated last week
- β52Updated last year
- Repository to host materials for the summer workshop on the dynamic brainβ30Updated 3 years ago
- "Approaches to Study Neural Circuits" courseβ66Updated 9 months ago
- Coding exercises for Neural Data Science at CSHL in 2019β29Updated 5 years ago
- Library to perform Slice Tensor Component Analysis (sliceTCA)β54Updated 6 months ago
- IaC codebase for the NeuroCAAS Platformβ38Updated last year
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)β47Updated 5 years ago
- IBL core shared librariesβ63Updated this week
- Notebooks from the workshop tutorial implementing and discussing a range of generative models commonly used in neuroscience.β38Updated 2 years ago
- Machine Learning Methods for Neural Data Analysisβ19Updated 4 months ago
- Implemenation of Manifold Inference from Neural Dynamics (MIND) from Low & Lewallen et. al, '18β30Updated 6 years ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes singβ¦β175Updated last month
- Neuroelectrophysiology object model and data analysis in Python.β50Updated last month
- Browser-based NWB visualization and DANDI explorationβ59Updated 2 weeks ago
- β28Updated last year
- Histology processingβ69Updated this week
- Code for Functional Mixed Models for Fiber Photometryβ13Updated last month
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two daysβ66Updated this week
- miniscope analysis pipeline with interactive visualizationsβ95Updated last year