Alternatives and similar repositories for openscope_databook

Users that are interested in openscope_databook are comparing it to the libraries listed below

• LorenFrankLab / spyglass
  Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
  ☆102Updated this week
• flatironinstitute / nemos
  NEural MOdelS, a statistical modeling framework for neuroscience.
  ☆101Updated this week
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆150Updated this week
• PeyracheLab / pynacollada
  pynapple collaborative data analysis (high level python scripts)
  ☆37Updated last year
• MouseLand / rastermap
  a visualization method for neural data
  ☆235Updated 4 months ago
• SjulsonLab / methods_class
  "Approaches to Study Neural Circuits" course
  ☆66Updated 7 months ago
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆127Updated last month
• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆47Updated 5 years ago
• RichieHakim / ROICaT
  Region Of Interest Classification and Tracking
  ☆22Updated this week
• catalystneuro / neuroconv
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆62Updated this week
• PridaLab / rippl-AI
  A open toolbox of several machine learning approaches for sharp-wave ripple detection
  ☆30Updated last year
• Whitlock-Group / HERBS
  ☆52Updated 11 months ago
• nelpy / nelpy
  Neuroelectrophysiology object model and data analysis in Python.
  ☆50Updated last week
• arthur-pe / slicetca
  Library to perform Slice Tensor Component Analysis (sliceTCA)
  ☆53Updated 5 months ago
• petersenpeter / CellExplorer
  CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…
  ☆104Updated 7 months ago
• cunningham-lab / neurocaas
  IaC codebase for the NeuroCAAS Platform
  ☆38Updated last year
• petersaj / AP_histology
  Histology processing
  ☆67Updated 3 weeks ago
• schultzlab / Neural_Manifolds
  A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and di…
  ☆27Updated last year
• AllenInstitute / swdb_2022
  Repository to host materials for the summer workshop on the dynamic brain
  ☆29Updated 2 years ago
• davindicode / cosyne-2023-generative-models
  Notebooks from the workshop tutorial implementing and discussing a range of generative models commonly used in neuroscience.
  ☆38Updated 2 years ago
• EricKenjiLee / WaveMAP_Paper
  This repo allows for the complete reproduction, from processed data, of all the main and supplemental figures in the manuscript Non-linea…
  ☆23Updated 2 years ago
• slinderman / ml4nd
  Machine Learning Methods for Neural Data Analysis
  ☆19Updated 2 months ago
• pillowlab / GLMspiketraintutorial_python
  ☆55Updated 2 years ago
• murthylab / GLMHMM
  ☆23Updated 5 years ago
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆63Updated this week
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆61Updated last year
• SpikeInterface / spiketoolkit
  Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.
  ☆50Updated 3 years ago
• inscopix / inscopix-cnmfe
  Algorithm for automated source extraction from 1P data
  ☆21Updated 2 years ago
• MouseLand / facemap
  Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…
  ☆173Updated 2 weeks ago
• EnnyvanBeest / UnitMatch
  Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days
  ☆65Updated last month