brainglobe / bg-brainrender-gui
A GUI built on brainrender: visualise brain regions, neurons and labelled cells.
☆12Updated 4 years ago
Alternatives and similar repositories for bg-brainrender-gui:
Users that are interested in bg-brainrender-gui are comparing it to the libraries listed below
- Visualisation and exploration of brain atlases☆9Updated 4 years ago
- Visualise brainreg registration output☆10Updated 3 years ago
- Read and write files from the BrainGlobe neuroanatomy suite☆13Updated 2 weeks ago
- Fancier logging with python.☆12Updated 2 weeks ago
- Automated 3D brain registration in napari with support for multiple species and atlases.☆15Updated last year
- ☆10Updated 2 years ago
- Loading and saving of image data.☆10Updated last year
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆17Updated 3 months ago
- A Python package to download neuronal morphologies☆17Updated 2 weeks ago
- Re-usable GitHub Action scripts☆10Updated 2 weeks ago
- Segmentation of anatomical structures in a common coordinate space☆30Updated 2 weeks ago
- Code for recreating the figures in the brainrender paper (Claudi et al. 2020)☆12Updated 4 years ago
- Napari plugin for working with video files.☆12Updated 5 months ago
- Registration to BrainGlobe atlases in napari using Elastix☆21Updated last week
- LISBET Is a Social BEhavior Transformer (LISBET)☆10Updated last month
- Rendering anatomical heatmaps with brainrender and matplotlib☆38Updated 2 weeks ago
- General information, resources and dicussions for the BrainGlobe project.☆11Updated 3 weeks ago
- Pose estimation scripts to be run on the SWC HPC cluster☆12Updated last year
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆21Updated last week
- Brainways☆16Updated last week
- Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by Spi…☆13Updated this week
- Utility to create a basic Python project structure with tests, CI etc.☆28Updated this week
- Tools for machine learning of animal behavior☆13Updated last year
- A package to manage electrophysiology analysis.☆19Updated this week
- How to use Aligning Big Brains and Atlases with Python☆15Updated last year
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 3 years ago
- Geometry Processing of Conventionally Produced Mouse Brain Slice Images☆7Updated 5 years ago