A GUI built on brainrender: visualise brain regions, neurons and labelled cells.
☆12Nov 26, 2020Updated 5 years ago
Alternatives and similar repositories for bg-brainrender-gui
Users that are interested in bg-brainrender-gui are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Visualise brainreg registration output☆10Nov 20, 2021Updated 4 years ago
- A Python package to download neuronal morphologies☆17Jul 14, 2026Updated last week
- General information, resources and dicussions for the BrainGlobe project.☆11Feb 21, 2025Updated last year
- NIU website on common software problems and their troubleshooting☆10Jul 14, 2026Updated last week
- ☆10Mar 15, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Jan 5, 2024Updated 2 years ago
- Anatomical space conventions made easy.☆12Jul 14, 2026Updated last week
- Build unbiased anatomical templates from individual images☆13Jul 14, 2026Updated last week
- ☆11Oct 21, 2025Updated 9 months ago
- Read and write files from the BrainGlobe neuroanatomy suite☆15Jul 14, 2026Updated last week
- Re-usable GitHub Action scripts☆14Jul 2, 2026Updated 3 weeks ago
- brainglobe.info website☆14Updated this week
- Fancier logging with python.☆16Jul 6, 2026Updated 2 weeks ago
- Loading and saving of image data.☆10Feb 9, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Derotate images acquired via multiphoton calcium imaging☆17Jul 6, 2026Updated 2 weeks ago
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆23Jul 14, 2026Updated last week
- Code for recreating the figures in the brainrender paper (Claudi et al. 2020)☆12Dec 11, 2020Updated 5 years ago
- Pose estimation scripts to be run on the SWC HPC cluster☆12Dec 5, 2023Updated 2 years ago
- Standalone cellfinder cell detection algorithm☆20Jan 3, 2024Updated 2 years ago
- Segmentation of anatomical structures in a common coordinate space☆36Jul 14, 2026Updated last week
- A package to manage electrophysiology analysis.☆23Updated this week
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆39Nov 24, 2023Updated 2 years ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆51Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Automated and reproducible analysis of multiphoton imaging datasets☆22Jul 3, 2026Updated 3 weeks ago
- Efficient cell detection in large images using cellfinder in napari☆22Jan 5, 2024Updated 2 years ago
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆24Jul 14, 2026Updated last week
- Mix-and-match computer vision tools for your animal behaviour analysis☆29Jul 6, 2026Updated 2 weeks ago
- Registration to BrainGlobe atlases in napari using Elastix☆30Jul 16, 2026Updated last week
- Utility to create a basic Python project structure with tests, CI etc.☆39Jul 16, 2026Updated last week
- A repository for our participation in Google Summer of Code☆13Apr 15, 2025Updated last year
- Tool for the creation, validation and transfer of neuroscience project folders.☆36Updated this week
- An R toolbox for analysing movement across space and time☆11Jun 29, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A Python interface to access neuroanatomical atlases☆182Updated this week
- Automated 3D brain registration with support for multiple species and atlases.☆149Updated this week
- Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by Spi…☆18Updated this week
- Tools, algorithms, and frameworks for managing and analyzing neural data.☆21Mar 21, 2022Updated 4 years ago
- A curated list of awesome Janelia software☆17Feb 26, 2025Updated last year
- Behavioral analysis via self-supervised pretraining of transformers☆28Jun 29, 2026Updated 3 weeks ago
- A pipeline built on napari that enables segmentation, detection, and tracking of animals in behavioral setups.☆16Updated this week