Alternatives and similar repositories for CEBRA

Users that are interested in CEBRA are comparing it to the libraries listed below

• AdaptiveMotorControlLab / AmadeusGPT
  We turn natural language descriptions of behaviors into machine-executable code
  ☆232Updated 7 months ago
• MouseLand / Kilosort
  Fast spike sorting with drift correction
  ☆586Updated last week
• SpikeInterface / spikeinterface
  A Python-based module for creating flexible and robust spike sorting pipelines.
  ☆725Updated this week
• pynapple-org / pynapple
  PYthon Neural Analysis Package
  ☆348Updated this week
• LINCellularNeuroscience / VAME
  Variational Animal Motion Embedding - A tool for time series embedding and clustering
  ☆198Updated last year
• arsedler9 / lfads-torch
  A PyTorch implementation of Latent Factor Analysis via Dynamical Systems (LFADS) and AutoLFADS.
  ☆124Updated last month
• MouseLand / facemap
  Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…
  ☆185Updated last week
• MouseLand / suite2p
  cell detection in calcium imaging recordings
  ☆427Updated 5 months ago
• sgoldenlab / simba
  SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers
  ☆348Updated this week
• RatInABox-Lab / RatInABox
  A python package for simulating movement and spatial cell types (e.g. place cells, grid cells) in continuous environments.
  ☆250Updated 3 weeks ago
• AdaptiveMotorControlLab / DLC2Kinematics
  a module for kinematic analysis of deeplabcut outputs
  ☆151Updated 2 years ago
• MouseLand / rastermap
  a visualization method for neural data
  ☆241Updated 10 months ago
• CYHSM / awesome-neuro-ai-papers
  Papers from the intersection of deep learning and neuroscience
  ☆431Updated 3 weeks ago
• YttriLab / B-SOID
  Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…
  ☆205Updated last year
• spoonsso / dannce
  ☆242Updated 9 months ago
• YttriLab / A-SOID
  An active learning platform for expert-guided, data efficient discovery of behavior.
  ☆66Updated 7 months ago
• dattalab / keypoint-moseq
  ☆103Updated 3 months ago
• LiuLab-Bioelectronics-Harvard / SpikeAgent
  SpikeAgent is a multimodal LLM-based AI agent that automates and standardizes the spike sorting pipeline
  ☆61Updated 2 months ago
• int-brain-lab / paper-brain-wide-map
  Code related to the brainwide map paper
  ☆33Updated 3 weeks ago
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆158Updated 3 weeks ago
• SpikeInterface / spikeinterface-gui
  GUI for spikeinterface objects
  ☆58Updated this week
• RobertRosenbaum / ModelingNeuralCircuits
  Code to accompany the textbook "Modeling Neural Circuits Made Simple"
  ☆164Updated last year
• fwillett / speechBCI
  Code for the paper "A high-performance speech neuroprosthesis"
  ☆193Updated 7 months ago
• neurallatents / nlb_tools
  Python tools for participating in Neural Latents Benchmark '21
  ☆66Updated last week
• AllenInstitute / openscope_databook
  OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…
  ☆75Updated 6 months ago
• DeepLabCut / DeepLabCut-live
  SDK for running DeepLabCut on a live video stream
  ☆229Updated this week
• neuroethology / bentoMAT
  A gui for browsing joint calcium imaging + behavioral data.
  ☆54Updated last year
• neuroethology / MARS
  End-user version of the Mouse Action Recognition System (MARS)
  ☆77Updated last year
• Julie-Fabre / awesome_neuropixels
  A curated list of awesome Neuropixels resources.
  ☆124Updated last month
• 8erberg / NeuroAI_Trainee_Resources
  ☆88Updated 11 months ago