Analysis of data produced by cvapipe for the variance paper
☆24Dec 23, 2024Updated last year
Alternatives and similar repositories for cvapipe_analysis
Users that are interested in cvapipe_analysis are comparing it to the libraries listed below
Sorting:
- Automated Cell Toolkit☆24Oct 15, 2025Updated 5 months ago
- ☆22May 1, 2025Updated 10 months ago
- The computational platform u-signal3D defines a shape-invariant representation of the spatial scales of molecular organization at the cel…☆11Mar 12, 2026Updated last week
- General Image Analysis of Nuclei-containing Images☆10Jul 11, 2025Updated 8 months ago
- CircRNA testing and ploting R package☆10Nov 23, 2020Updated 5 years ago
- ☆32Jul 31, 2025Updated 7 months ago
- ☆30Updated this week
- Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python☆222Dec 1, 2025Updated 3 months ago
- GREAT algorithm in Python☆14Oct 24, 2022Updated 3 years ago
- scGRO-seq analyses codes☆13Jan 9, 2024Updated 2 years ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆25Nov 25, 2025Updated 3 months ago
- Modular, object-based analysis for ImageJ/Fiji☆16Mar 12, 2026Updated last week
- Paint segmentations directly to on-disk/remote zarr arrays☆15Jun 26, 2024Updated last year
- astir | Automated cell identity from single-cell multiplexed imaging and proteomics 🖥🔬✨☆56Jun 25, 2025Updated 8 months ago
- ☆12Jan 27, 2024Updated 2 years ago
- Can we build a neural network that can tell the difference between Stephen Colbert and Conan O'Brien? Yes, yes we can!☆19Mar 4, 2020Updated 6 years ago
- ☆22Aug 17, 2023Updated 2 years ago
- PASTA: Learning Parameter-specific Affine Transformation for Medical Images Registration☆14Oct 4, 2021Updated 4 years ago
- multimodal whole slide image registration in a graph structure☆101Jul 4, 2024Updated last year
- Process and analyze surfaces using vedo in napari.☆25May 13, 2024Updated last year
- a scalable python suite for tree inference and advanced pseudotime analysis from scRNAseq data.☆67Feb 11, 2026Updated last month
- OpenBCI 32bit SD code☆11Sep 5, 2017Updated 8 years ago
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆22Jun 28, 2024Updated last year
- Methods for visualization and analysis of spatially-resolved gene expression☆23Aug 14, 2025Updated 7 months ago
- hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data☆13Jul 12, 2024Updated last year
- Biologically-informed deep learning for cell segmentation of subcelluar spatial transcriptomics data☆48Jul 16, 2024Updated last year
- Library for managing, storage, viewing, and working with spatial transcriptomics data using Imglib2, N5, BigDataViewer and Fiji.☆31May 27, 2025Updated 9 months ago
- Part 1 of Allen Cell and Structure Segmenter: classic image segmentation workflow☆25Jul 22, 2024Updated last year
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆34Oct 8, 2025Updated 5 months ago
- XTensions built using Python 3.7 for Imaris software☆11Jan 8, 2026Updated 2 months ago
- ☆25Aug 5, 2025Updated 7 months ago
- ☆13Sep 29, 2023Updated 2 years ago
- A relabeling tool for tiled segmentation with Dask☆17Sep 24, 2024Updated last year
- Friendly base POM for all SciJava-based software☆28Mar 7, 2026Updated last week
- Comprehensive hosts to block Ads, Analytics, Tracking & Telemetry based on Exodus list☆11Oct 31, 2024Updated last year
- example gallery for regl☆15May 30, 2020Updated 5 years ago
- StarDist plugin for napari☆39Aug 24, 2024Updated last year
- ShapeEmbedLite: a lightweight self-supervised representation learning model for 2D shape analysis☆21Oct 13, 2025Updated 5 months ago
- Export your Google Voice call & text history as JSON☆17Feb 26, 2022Updated 4 years ago