Graph-based Decoding for In Situ Sequencing
☆10Jul 2, 2020Updated 5 years ago
Alternatives and similar repositories for graph-iss
Users that are interested in graph-iss are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Py-Alpha-AMD Registration Framework - Robust Image Registration - Public Release☆19Jul 4, 2019Updated 6 years ago
- MERFISH decoding software☆26Aug 16, 2025Updated 9 months ago
- Threshold independent detection and localization of diffraction-limited spots.☆39Apr 8, 2026Updated last month
- EASI-FISH analysis pipeline for spatial transcriptomics☆36Apr 15, 2026Updated last month
- ☆18Oct 12, 2019Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Oct 30, 2017Updated 8 years ago
- Whole slide image registration through wsireg in napari.☆12Apr 21, 2023Updated 3 years ago
- Python bindings for MMCore, Micro-Manager's device control layer☆34May 6, 2026Updated 3 weeks ago
- Cellular Genetics Informatics Notebooks☆24Nov 7, 2025Updated 6 months ago
- Visualize genomic data using webgl and webworkers, in an effort to provide a fluid, high-performance user experience.☆11May 24, 2024Updated 2 years ago
- iFISH Probe Design: a Python3 package to build iFISH probes.☆12Mar 11, 2022Updated 4 years ago
- Montaging for microscopy imaging files☆30Apr 25, 2026Updated last month
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆73May 4, 2026Updated 3 weeks ago
- Deep Learning papers reading roadmap for anyone who are eager to learn this amazing tech!☆10Mar 7, 2018Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Running compute-intense parts of BigStitcher distributed☆30May 21, 2026Updated last week
- N-dimensional, multiresolution file format for Micro-Manager☆14Mar 13, 2026Updated 2 months ago
- Web-based interactive lens design tool.☆14May 11, 2026Updated 2 weeks ago
- Fast phenograph, CyTOF☆26Aug 19, 2022Updated 3 years ago
- Open source SMLM microscope designs☆13May 31, 2023Updated 2 years ago
- Tools for DLO HiC data analyze☆16Oct 31, 2022Updated 3 years ago