Alternatives and similar repositories for training-modules:

Users that are interested in training-modules are comparing it to the libraries listed below

• crazyhottommy / papers_with_data_to_mine
  published papers with a lot of data
  ☆65Updated last week
• praneet1988 / CSBB-Shiny
  Computational Suite for Bioinformaticians and Biologists (CSBB) is a RShiny application developed with an intention to empower researcher…
  ☆36Updated last year
• saezlab / transcriptutorial
  This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL
  ☆55Updated last year
• BaderLab / CellAnnotationTutorial
  Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods
  ☆89Updated last year
• ucdavis-bioinformatics-training / 2017_2018-single-cell-RNA-sequencing-Workshop-UCD_UCB_UCSF
  2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF
  ☆35Updated 6 years ago
• Bioconductor / CSAMA
  Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology
  ☆92Updated 7 months ago
• elimereu / matchSCore2
  ☆53Updated 4 years ago
• Nik-Zainal-Group / signature.tools.lib
  R package containing useful functions for mutational signature analysis
  ☆80Updated this week
• drisso / bioc2016singlecell
  Bioconductor workshop: Analysis of single-cell RNA-seq data with R and Bioconductor
  ☆78Updated 8 years ago
• wjawaid / enrichR
  An R interface to enrichR
  ☆88Updated 2 weeks ago
• crazyhottommy / compbio_tutorials
  My youtube programming scripts
  ☆51Updated last month
• sib-swiss / single-cell-training
  SIB course on single cell transcriptomics by mostly using the Seurat pipeline
  ☆79Updated 2 months ago
• rpolicastro / scProportionTest
  ☆60Updated last year
• friedue / Notes
  Personal notes about work- and coding-related topics
  ☆20Updated last year
• bigbioinformatics / single_cell_rna_seq_workshop
  repository for the single cell RNA-Seq workshop
  ☆27Updated 3 years ago
• MangiolaLaboratory / sccomp
  Mixed-effect model to test differences in cell type proportions from single-cell data, in R
  ☆99Updated this week
• thelovelab / rnaseqGene
  RNA-seq workflow: exploratory analysis and differential expression
  ☆75Updated last year
• OSCA-source / OSCA
  The package wrapping the book, for deployment via the Bioconductor build system.
  ☆83Updated 3 months ago
• Novartis / easyTrackHubs
  This package provides a function to reformat lists of genome coverage files, such as bigWig of bam files, into the directory structure of…
  ☆28Updated 9 months ago
• hbctraining / DGE_workshop_salmon
  ☆71Updated 3 years ago
• bvieth / powsimR
  Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…
  ☆106Updated last year
• tavareshugo / tutorial_DESeq2_contrasts
  ☆58Updated 9 months ago
• mikelove / preNivolumabOnNivolumab
  EDA, QC, and DESeq2 / edgeR analysis of 109 RNA-seq samples of immunotherapy treatment
  ☆55Updated last year
• pachterlab / kallisto-transcriptome-indices
  Reference transcriptome indices build from kallisto for popular organisms
  ☆42Updated last year
• tidyomics / tidyomics
  Easily install and load packages from the tidyomcis ecosystem
  ☆63Updated 11 months ago
• Bioconductor / OrchestratingSingleCellAnalysis
  Content for the OSCA Book.
  ☆66Updated last year
• MarioniLab / miloDE
  Framework for sensitive DE testing (using neighbourhoods)
  ☆64Updated 7 months ago
• hbctraining / versioning_data_scripts
  GitKraken lesson (forked from HBS-RCS)
  ☆9Updated 3 years ago
• hbctraining / main
  ☆52Updated last week
• GangLiLab / genekitr
  🧬 Gene analysis toolkit based on R
  ☆55Updated last month