AlexsLemonade / OpenPBTA-manuscriptLinks
The manuscript repository for the Open Pediatric Brain Tumor Atlas Project
☆13Updated 2 years ago
Alternatives and similar repositories for OpenPBTA-manuscript
Users that are interested in OpenPBTA-manuscript are comparing it to the libraries listed below
Sorting:
- Transcript quantification import with automatic metadata detection☆68Updated last month
- Statistical power studies for multi-omics experiments.☆32Updated 5 months ago
- Multi-omics data normalisation, model fitting and visualisation.☆25Updated 2 years ago
- Bioinformatics for Benched Biologists☆22Updated 5 years ago
- Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)☆28Updated 9 years ago
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆13Updated this week
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆23Updated 4 years ago
- Genomic data interpretation and visualization Workshop☆20Updated 3 weeks ago
- Explore the cancer relevance of your gene list☆51Updated 3 months ago
- This github repository contains code to reproduce the analysis in our paper "Variability in estimated gene expression among commonly used…☆28Updated last year
- Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor☆22Updated this week
- ☆29Updated 8 months ago
- Summer school course materials collection☆26Updated 6 years ago
- This repository contains course materials from JAX-BD2K workshop.☆32Updated 6 years ago
- My notes/usage examples for various Bioconductor packages☆15Updated 8 years ago
- co-expressed gene-set enrichment analysis☆12Updated last year
- Bioconductor package that makes BIG data pint-sized.☆21Updated last year
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- Analysis for svaseq paper☆19Updated 10 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- MeSH Enrichment and Semantic analyses☆12Updated 2 months ago
- Website for the precision medicine workshop☆45Updated 3 weeks ago
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 4 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 3 years ago
- Best practice RNA-Seq analysis pipeline for reference-based RNA-Seq analysis☆40Updated 4 years ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated last year
- ☆19Updated 2 years ago
- R package providing query functionality to BioMart instances like Ensembl☆44Updated last month
- Rna-seq pipeline, From FASTQ to differential expression analysis...☆20Updated 8 years ago