A comprehensive tutorial for proteomics data analysis in R that utilizes packages developed by researchers at PNNL and from Bioconductor.
☆11May 28, 2022Updated 3 years ago
Alternatives and similar repositories for proteomics-data-analysis-tutorial
Users that are interested in proteomics-data-analysis-tutorial are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Peptide Correlation analysis☆11Oct 3, 2024Updated last year
- R package to read ImageJ ROI files☆12Aug 17, 2024Updated last year
- Source code for the reproduction of RibbonFold paper.☆12May 10, 2025Updated last year
- ☆70May 7, 2024Updated 2 years ago
- This is a virtual environment which contains databases, software, workflows, and workshops for Precision Health Data Analysis.☆23Mar 31, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A list of tools on proteomics using deep learning☆108May 14, 2026Updated last week
- This repository contains the code for the paper "Exploiting Foundation Models and Speech Enhancement for Parkinson's Disease Detection fr…☆12Dec 19, 2025Updated 5 months ago
- R package: determining cutoff values from bimodal data☆11Mar 17, 2024Updated 2 years ago
- This is where TOG houses all of its workshop scripts, as well as details on its upcoming workshops and seminars.☆45Jun 7, 2024Updated last year
- Imputing proteomics data using deep learning models☆34May 13, 2026Updated last week
- Data for analysis of the MoTrPAC endurance exercise training study in 6-month-old rats☆16Aug 13, 2025Updated 9 months ago
- Create Regional Association Plots☆13Sep 7, 2025Updated 8 months ago
- ☆15Apr 8, 2026Updated last month
- GOAT: efficient and robust identification of gene set enrichment☆14Jan 24, 2026Updated 3 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Course material for CB2030☆15Mar 13, 2026Updated 2 months ago
- Proteomics Mass Spectrometry Datasets for Machine Learning☆22Aug 16, 2024Updated last year
- Code and manuscript files for Aaron and Karsten's deconvolution paper.☆16Nov 18, 2018Updated 7 years ago
- ALLSorts is a B-Cell Acute Lymphoblastic Leukemia (B-ALL) subtype classifier. From gene expression counts to over 18 subtypes.☆17Jul 30, 2025Updated 9 months ago
- Software to infer latent pleiotropic components from GWAS summary data☆16Jan 30, 2025Updated last year
- QUANtification by Distillation for ENhanced Signals with Error Regulation☆10Aug 20, 2022Updated 3 years ago
- Layered enrichment analysis tool enables facile enrichment using various statistics at once.☆19Mar 11, 2026Updated 2 months ago
- Finds DAMEs - Differential Allelicly MEthylated regions☆10Jul 29, 2025Updated 9 months ago
- Scripts and files for the annual Short Read Analysis Workshop☆13May 4, 2026Updated 2 weeks ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- An accurate and efficient colocalization method accounting for multiple causal signals☆13Jun 3, 2024Updated last year
- ☆12Jun 28, 2024Updated last year
- Workshop: Using R/tidyverse to analyze & visualize gapminder/processed transcriptomics data!☆13Sep 12, 2025Updated 8 months ago
- Post Translational Modification (PTM) Significance Analysis in shotgun mass spectrometry-based proteomic experiments☆14Apr 29, 2026Updated 3 weeks ago
- ☆10Aug 17, 2022Updated 3 years ago
- BioMM: Biological-informed Multi-stage Machine learning framework for phenotype prediction using omics data☆14Jan 3, 2023Updated 3 years ago
- The Git Account of LCMSMethods.org☆11Jun 1, 2019Updated 6 years ago
- UZH BIO392: Bioinformatics of Sequence Variation Course Repository☆14May 6, 2026Updated 2 weeks ago
- Deep Learning tools for medical image and biomarker analysis☆19Jan 11, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- CADD-SV – a framework to score the effect of structural variants☆19May 13, 2026Updated last week
- Base-wise aggregation and functional prediction for human non-coding regulatory variants☆15Dec 20, 2023Updated 2 years ago
- allele specific DNA methylation haplotype region☆13Oct 18, 2023Updated 2 years ago
- Quantitative proteomics workflow☆16Sep 30, 2022Updated 3 years ago
- All books (free and non-free) that have been ever published about Git☆28Feb 9, 2025Updated last year
- This is a collection of minimal code to visualize various aspects of proteomics data.☆83Jan 6, 2022Updated 4 years ago
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆94Nov 17, 2025Updated 6 months ago