open-ephys / Bonsai.MiniscopeLinks
Bonsai package for controlling headborne, calcium imaging miniscopes
☆12Updated last year
Alternatives and similar repositories for Bonsai.Miniscope
Users that are interested in Bonsai.Miniscope are comparing it to the libraries listed below
Sorting:
- Histology processing☆72Updated last month
- Registration of cells across sessions.☆75Updated last year
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆80Updated 9 months ago
- miniscope analysis pipeline with interactive visualizations☆97Updated last year
- ☆52Updated last year
- ☆12Updated 9 years ago
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆64Updated last year
- Tools to work with Allen Inst CCF data in matlab☆143Updated 6 months ago
- Fiber Photometry Modular Analysis Tool Suite☆42Updated 4 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated last week
- SpikeGLX postprocessing [tshift filter CAR fix join extract]☆14Updated last week
- An open-source ecosystem of hardware and software for head-fixed behavior☆13Updated 3 months ago
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated 2 weeks ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆139Updated last month
- Calcium imaging inter-session alignment☆15Updated last month
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- pyqt5 dependent applications for IBL sessions☆32Updated 3 months ago
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆40Updated last month
- A curated list of awesome Neuropixels resources.☆122Updated last month
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆28Updated last month
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆30Updated last month
- Collection of probe description for probeinterface☆17Updated this week
- cortex lab code for electrophysiology☆85Updated last year
- Utilities for managing Neuropixel datasets and Kilosort results☆48Updated 8 months ago
- SpikeGLX recording system GUI [Neuropixels NI]☆100Updated this week
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Updated last year
- UnitRefine is a machine-learning toolbox that simplifies spike sorting curation by reducing manual curation.☆65Updated 2 weeks ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆64Updated last month
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 11 months ago