Alternatives and similar repositories for B-SOID

Users that are interested in B-SOID are comparing it to the libraries listed below

• DeepLabCut / DLCutils
  Various scripts to support deeplabcut and what to do afterwards!
  ☆155Updated last year
• LINCellularNeuroscience / VAME
  Variational Animal Motion Embedding - A tool for time series embedding and clustering
  ☆186Updated 8 months ago
• AdaptiveMotorControlLab / DLC2Kinematics
  a module for kinematic analysis of deeplabcut outputs
  ☆140Updated last year
• ETHZ-INS / DLCAnalyzer
  R Scripts to analyze deep lab cut point data and related data
  ☆67Updated 2 years ago
• dattalab / keypoint-moseq
  ☆91Updated this week
• YttriLab / A-SOID
  An active learning platform for expert-guided, data efficient discovery of behavior.
  ☆59Updated last month
• jbohnslav / deepethogram
  ☆107Updated 4 months ago
• sgoldenlab / simba
  SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers
  ☆323Updated this week
• DeepLabCut / DeepLabCut-Workshop-Materials
  Workshop material for using DeepLabCut
  ☆144Updated last year
• neuroethology / bentoMAT
  A gui for browsing joint calcium imaging + behavioral data.
  ☆51Updated 4 months ago
• neuroethology / MARS
  End-user version of the Mouse Action Recognition System (MARS)
  ☆67Updated last year
• MouseLand / facemap
  Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…
  ☆166Updated 2 months ago
• paninski-lab / deepgraphpose
  DeepGraphPose
  ☆32Updated 2 years ago
• AdaptiveMotorControlLab / AmadeusGPT
  We turn natural language descriptions of behaviors into machine-executable code
  ☆219Updated last month
• gordonberman / MotionMapper
  Sample implementation of the MotionMapper behavioral analysis algorithms
  ☆79Updated 4 years ago
• bonsai-rx / deeplabcut
  A Bonsai interface for real-time markerless pose estimation using DeepLabCut
  ☆50Updated this week
• SchwarzNeuroconLab / DeepLabStream
  Closed-loop behavioral experiment toolkit using pose estimation of body parts.
  ☆55Updated last year
• PolarBean / DLC_ROI_tool
  A tool for drawing ROIs on videos and analysing deeplabcut videos.
  ☆33Updated 4 years ago
• lwillmore / QuantifyingDefeat
  quantification of behavior across chronic social defeat stress
  ☆10Updated 2 years ago
• bermanlabemory / motionmapperpy
  Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)
  ☆29Updated last year
• jessedmarshall / CAPTURE_demo
  Demo code for CAPTURE and DANNCE
  ☆29Updated 3 years ago
• huangkang314 / Behavior-Atlas
  ☆33Updated 4 years ago
• mlfpm / deepof
  DeepLabCut based data analysis package including pose estimation and representation learning mediated behavior recognition
  ☆44Updated this week
• EthoML / VAME
  Variational Animal Motion Embedding - A tool for time series embedding and clustering
  ☆26Updated this week
• DeepLabCut / DeepLabCut-live-GUI
  GUI to run DeepLabCut on live video feed
  ☆62Updated 7 months ago
• zivlab / CellReg
  Registration of cells across sessions.
  ☆75Updated 9 months ago
• dattalab / moseq2-app
  MoSeq2 Jupyter Notebook platform used to run all of the MoSeq2 tools in a GUI.
  ☆34Updated 4 months ago
• pyratlib / pyrat
  PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…
  ☆47Updated last year
• cortex-lab / allenCCF
  Tools to work with Allen Inst CCF data in matlab
  ☆134Updated last year
• Whitlock-Group / HERBS
  ☆51Updated 9 months ago