Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with supervised classification to achieve fast predictions of behaviors that are not predefined by users.
☆208Feb 9, 2024Updated 2 years ago
Alternatives and similar repositories for B-SOID
Users that are interested in B-SOID are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆201Oct 3, 2024Updated last year
- Various scripts to support deeplabcut and what to do afterwards!☆161Jul 1, 2025Updated 10 months ago
- An active learning platform for expert-guided, data efficient discovery of behavior.☆72Jun 11, 2025Updated 10 months ago
- SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers☆357Apr 25, 2026Updated last week
- R Scripts to analyze deep lab cut point data and related data☆72Jan 25, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆62Jul 1, 2023Updated 2 years ago
- a module for kinematic analysis of deeplabcut outputs☆153Dec 13, 2023Updated 2 years ago
- ☆122Mar 31, 2026Updated last month
- PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…☆53Apr 22, 2024Updated 2 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆41Jan 6, 2026Updated 3 months ago
- End-user version of the Mouse Action Recognition System (MARS)☆79Mar 26, 2024Updated 2 years ago
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆35Apr 24, 2026Updated last week
- A deep learning framework for multi-animal pose tracking.☆575Updated this week
- Code package that allows meta analyses of unsupervised behavior results☆21Jun 5, 2025Updated 10 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- AlphaTracker is a computer vision pipeline with the practical and real-time advantages , which requires minimal hardware requirements and…☆74Sep 26, 2023Updated 2 years ago
- DeepGraphPose☆32Nov 27, 2022Updated 3 years ago
- Learning trajectory representations using self-supervision and programmatic supervision.☆87Sep 14, 2022Updated 3 years ago
- Tools for machine learning of animal behavior☆15Mar 8, 2024Updated 2 years ago
- ☆108Feb 26, 2026Updated 2 months ago
- Sample implementation of the MotionMapper behavioral analysis algorithms☆81Sep 8, 2020Updated 5 years ago
- Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals incl. human…☆5,597Updated this week
- a Python API to record video & system timestamps from Imaging Source USB cameras☆71Feb 21, 2023Updated 3 years ago
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆54Jun 1, 2025Updated 11 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆14Sep 2, 2020Updated 5 years ago
- We turn natural language descriptions of behaviors into machine-executable code☆237Jun 30, 2025Updated 10 months ago
- ☆21Nov 28, 2023Updated 2 years ago
- Behavioral Keypoint Discovery☆39Jun 13, 2023Updated 2 years ago
- Mouse grooming neural network training and inference code for single mice in open field assays.☆10Mar 29, 2021Updated 5 years ago
- 🐜🐀🐒🚶 A toolkit for robust markerless 3D pose estimation☆440Jan 20, 2026Updated 3 months ago
- ☆248Apr 25, 2025Updated last year
- ☆32Jun 6, 2019Updated 6 years ago
- Distributed behavioral experiments☆94Feb 19, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Quantify user-defined behaviors.☆106Jan 23, 2026Updated 3 months ago
- ☆18Feb 1, 2024Updated 2 years ago
- Guided Photometry Analysis in Python, a free and open-source FP analysis tool.☆85Updated this week
- ☆47Jul 28, 2022Updated 3 years ago
- MoSeq2 Jupyter Notebook platform used to run all of the MoSeq2 tools in a GUI.☆41Feb 18, 2026Updated 2 months ago
- ☆29Oct 22, 2025Updated 6 months ago
- ☆38Mar 22, 2021Updated 5 years ago