Aharoni-Lab / Miniscope-DAQ-QT-SoftwareLinks
Software for streaming and controlling neural and behavioral data from freely behaving animals
☆126Updated last year
Alternatives and similar repositories for Miniscope-DAQ-QT-Software
Users that are interested in Miniscope-DAQ-QT-Software are comparing it to the libraries listed below
Sorting:
- Registration of cells across sessions.☆75Updated last year
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- All things Miniscope v4☆141Updated 2 years ago
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆37Updated 2 weeks ago
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Updated last year
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆77Updated 8 months ago
- Free, platform independent, behavior tracking software.☆139Updated 2 months ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆151Updated 2 weeks ago
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆62Updated last year
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆76Updated 4 months ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆93Updated 9 months ago
- ☆52Updated 11 months ago
- Histology processing☆69Updated last month
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 10 months ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆105Updated 8 months ago
- pyqt5 dependent applications for IBL sessions☆28Updated 2 weeks ago
- Tools to work with Allen Inst CCF data in matlab☆139Updated last month
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆174Updated last month
- Tools to register histological section images and cell count locations to mouse brain atlas☆28Updated 3 years ago
- Fiber Photometry Modular Analysis Tool Suite☆40Updated 4 years ago
- SpikeGLX recording system GUI [Neuropixels NI]☆93Updated last week
- Image processing and tools for widefield imaging☆18Updated 5 years ago
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated last week
- Large field-of-view miniature microscope for rats and larger animals.☆17Updated 2 years ago
- cortex lab code for electrophysiology☆83Updated last year
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆128Updated last month
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆51Updated last year
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆62Updated this week
- a visualization method for neural data☆235Updated 4 months ago