Aharoni-Lab / Miniscope-DAQ-QT-SoftwareLinks
Software for streaming and controlling neural and behavioral data from freely behaving animals
☆126Updated last year
Alternatives and similar repositories for Miniscope-DAQ-QT-Software
Users that are interested in Miniscope-DAQ-QT-Software are comparing it to the libraries listed below
Sorting:
- All things Miniscope v4☆144Updated 2 years ago
- Registration of cells across sessions.☆75Updated last year
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆81Updated 11 months ago
- ☆52Updated last year
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆62Updated last year
- Histology processing☆71Updated 2 months ago
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆156Updated last month
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆78Updated 7 months ago
- SpikeGLX recording system GUI [Neuropixels NI]☆98Updated last week
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆40Updated 2 weeks ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Updated last year
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆110Updated last month
- Tools to work with Allen Inst CCF data in matlab☆142Updated 4 months ago
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆53Updated 2 years ago
- Free, platform independent, behavior tracking software.☆142Updated 4 months ago
- cortex lab code for electrophysiology☆85Updated last year
- pyqt5 dependent applications for IBL sessions☆31Updated last month
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Updated last year
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated last year
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 9 months ago
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆70Updated 2 months ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆137Updated 4 months ago
- Utilities for managing Neuropixel datasets and Kilosort results☆49Updated 6 months ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆61Updated 2 years ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆64Updated last month
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆122Updated last year
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆179Updated 3 months ago
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated this week