Aharoni-Lab / Miniscope-LFOV
Large field-of-view miniature microscope for rats and larger animals.
☆13Updated last year
Alternatives and similar repositories for Miniscope-LFOV:
Users that are interested in Miniscope-LFOV are comparing it to the libraries listed below
- Tools to register histological section images and cell count locations to mouse brain atlas☆25Updated 2 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆36Updated 6 months ago
- Fiber photometry analysis☆22Updated 2 weeks ago
- Match suite2p ROIs between imaging sessions☆25Updated 6 years ago
- Fiber Photometry Modular Analysis Tool Suite☆38Updated 3 years ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 7 months ago
- Histology processing☆65Updated this week
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆34Updated 2 weeks ago
- miniscope analysis pipeline with interactive visualizations☆93Updated 8 months ago
- A GUI and library for doing multi-fiber photometry☆18Updated 7 years ago
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆22Updated 3 weeks ago
- ☆19Updated last year
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆59Updated 10 months ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆13Updated last month
- pyqt5 dependent applications for IBL sessions☆26Updated this week
- A gui for browsing joint calcium imaging + behavioral data.☆51Updated 2 months ago
- Open-source stereotaxic coordinator☆15Updated 2 years ago
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Updated last year
- Registration of cells across sessions.☆75Updated 7 months ago
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆25Updated last month
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆49Updated last year
- Multi-probe trajectory planning in an intuitive 3D environment☆52Updated this week
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆25Updated last year
- Utilities for managing Neuropixel datasets and Kilosort results☆46Updated last year
- Code for Functional Mixed Models for Fiber Photometry☆10Updated 3 weeks ago
- Feeding Experimentation Device version 3☆26Updated 7 months ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆73Updated 4 months ago
- ☆51Updated 7 months ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆100Updated 4 months ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆59Updated last month