3D Conformation-aware Conditional Language Model for Clinical Drug Response Prediction with Multi-order Regulatory Mechanisms
☆35Jan 8, 2026Updated 9 months ago
Alternatives and similar repositories for ClinDRP
Users that are interested in ClinDRP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Github for the TOPCONS2☆17Mar 6, 2025Updated last year
- Controllable Protein Sequence Generation with LLM Preference Optimization, AAAI 2025☆18Mar 10, 2025Updated last year
- Parallel Sequence to Graph Alignment☆36Nov 26, 2022Updated 3 years ago
- POSTRE: Prediction Of STRuctural variant Effects☆31Sep 3, 2026Updated last month
- Python 3 implementation of Jinbo Xu's paper "Distance-based protein folding powered by deep learning", PNAS August 20, 2019 116 (34)☆22Aug 2, 2022Updated 4 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Structural variant caller for real-time long-read sequencing data☆64Dec 1, 2022Updated 3 years ago
- ☆71Mar 18, 2026Updated 7 months ago
- ☆144Jun 3, 2025Updated last year
- All-atom inverse protein folding through discrete flow matching (ICML2025)☆47Mar 22, 2026Updated 7 months ago
- Code repository of "Deep generative design of RNA family sequences"☆44Apr 8, 2026Updated 6 months ago
- Official repository of PXDesign☆272Dec 31, 2025Updated 10 months ago
- Implementation of MapDiff: "Mask-prior-guided denoising diffusion improves inverse protein folding" in PyTorch☆49Jul 11, 2025Updated last year
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆59May 6, 2024Updated 2 years ago
- Pseudo Likelihood Maximization for protein in Julia☆52May 15, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- AI-powered macromolecular refinement☆51Apr 26, 2026Updated 6 months ago
- ☆72Oct 13, 2026Updated 2 weeks ago
- PointSite: a point cloud segmentation tool for identification of protein ligand binding atoms☆58Mar 9, 2023Updated 3 years ago
- ☆54Dec 3, 2023Updated 2 years ago
- A protein 3D structure prediction application☆68May 5, 2021Updated 5 years ago
- ☆80Oct 19, 2024Updated 2 years ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆73Apr 13, 2026Updated 6 months ago
- abPOA: an SIMD-based C library for fast partial order alignment using adaptive band☆148Sep 17, 2026Updated last month
- ☆167Aug 11, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆141Oct 30, 2025Updated last year
- De novo assembly from Oxford Nanopore reads.☆90Jun 29, 2026Updated 4 months ago
- Geometric deep learning of protein–DNA binding specificity☆81Mar 19, 2025Updated last year
- Source code for RNA-FrameFlow: SE(3) Flow Matching for 3D RNA Backbone Design☆104Oct 15, 2025Updated last year
- The first large protein language model trained follows structure instructions.☆103May 20, 2025Updated last year
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆99Aug 29, 2023Updated 3 years ago
- Model for predicting micro-millisecond motions from protein sequence and/or structure☆118Aug 20, 2026Updated 2 months ago
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆115Oct 23, 2023Updated 3 years ago
- Aligning protein generative models with experimental fitness☆154Mar 12, 2026Updated 7 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Fast deep learning methods for large-scale protein-protein interaction screening☆136Aug 3, 2025Updated last year
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆143Jan 28, 2026Updated 9 months ago
- ☆134Mar 24, 2023Updated 3 years ago
- Geometric Vector Perceptron --- a rotation-equivariant GNN for learning from biomolecular structure☆164May 1, 2021Updated 5 years ago
- A versatile pairwise aligner for genomic and spliced nucleotide sequences☆2,262May 19, 2026Updated 5 months ago
- The resources of LucaOne, including: the model code, training scripts, embedding inference code, and trained checkpoints.☆371Oct 4, 2026Updated 3 weeks ago
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆194Oct 7, 2025Updated last year