Alternatives and similar repositories for TOPCONS2

Users that are interested in TOPCONS2 are comparing it to the libraries listed below

• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆38Updated last year
• psipred / merizo_search
  Fast protein domain structure embedding+search tool
  ☆21Updated 2 weeks ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆54Updated 2 months ago
• KULL-Centre / _2022_functional-sites-cagiada
  ☆22Updated last year
• JudeWells / chainsaw
  ☆39Updated 8 months ago
• KIT-MBS / pydca
  Direct coupling analysis software for protein and RNA sequences
  ☆50Updated 3 weeks ago
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆65Updated 7 years ago
• proteinphysiologylab / frustratometeR
  ☆36Updated 7 months ago
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆41Updated last month
• GreiffLab / manuscript_ab_epitope_interaction
  ☆25Updated last year
• SNU-CSSB / RF2-Lite
  ☆30Updated last year
• labstructbioinf / pLM-BLAST
  Detection of remote homology by comparison of protein language model representations
  ☆53Updated 5 months ago
• hgbrian / biocolabs
  a collection of colabs useful for molecular biology
  ☆30Updated last year
• wells-wood-research / de-stress
  DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.
  ☆24Updated 3 months ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆88Updated last year
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆43Updated last year
• minmarg / gtalign_alpha
  GTalign, HPC protein structure alignment, superposition and search (alpha release)
  ☆45Updated 4 months ago
• psipred / DMPfold2
  Fast and accurate protein structure prediction
  ☆52Updated 4 months ago
• UCLOrengoGroup / cath-alphaflow
  ☆21Updated 2 weeks ago
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆56Updated 5 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated 2 months ago
• Rostlab / ConSurf
  Evolutionary conservation estimation of residues or nucleotides
  ☆42Updated 3 years ago
• MPI-Dortmund / pymissense
  PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.
  ☆23Updated last year
• lasersonlab / pepsyn
  Peptide library design
  ☆23Updated 4 years ago
• ThomasCMcLean / LazyAF
  Code for LazyAF pipeline
  ☆20Updated last year
• harmslab / topiary
  Python framework for doing ancestral sequence reconstruction
  ☆38Updated 10 months ago
• sokrypton / map_align
  Contact map alignment
  ☆41Updated 4 years ago
• fhalab / evSeq
  Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
  ☆34Updated 3 years ago
• RomeroLab / omega
  OMEGA code described in "Scalable and cost-efficient custom gene library assembly from oligopools."
  ☆29Updated this week
• steineggerlab / folddisco
  Fast indexing and search of discontinuous motifs in protein structures
  ☆22Updated 3 weeks ago