drorlab / gvpLinks
Geometric Vector Perceptron --- a rotation-equivariant GNN for learning from biomolecular structure
☆162Updated 4 years ago
Alternatives and similar repositories for gvp
Users that are interested in gvp are comparing it to the libraries listed below
Sorting:
- ☆240Updated 2 years ago
- Geometric Vector Perceptrons --- a rotation-equivariant GNN for learning from biomolecular structure☆317Updated 2 months ago
- ☆130Updated 3 years ago
- EquiDock: geometric deep learning for fast rigid 3D protein-protein docking☆254Updated 2 years ago
- ☆108Updated 2 years ago
- Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)☆227Updated 2 years ago
- Database of Interacting Protein Structures (DIPS)☆103Updated 2 years ago
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆110Updated last year
- ☆212Updated last year
- Generative Models for Graph-Based Protein Design☆284Updated 5 years ago
- open source repository☆145Updated 2 years ago
- ☆138Updated 7 months ago
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆111Updated 2 years ago
- Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models …☆265Updated 9 months ago
- source code for https://arxiv.org/abs/2005.11248 "Accelerating Antimicrobial Discovery with Controllable Deep Generative Models and Molec…☆110Updated 4 months ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆125Updated 11 months ago
- Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation☆127Updated 3 years ago
- Graph Network for protein-protein interface☆121Updated last year
- Open source code for TankBind. Galixir Tenchnologies☆173Updated 2 years ago
- The Enhanced Database of Interacting Protein Structures for Interface Prediction☆53Updated 5 months ago
- Generative Language Modeling for Antibody Design☆180Updated last year
- Dataset and package for working with protein-protein interactions in 3D☆104Updated 9 months ago
- An awesome & curated list of docking papers☆125Updated last month
- PINDER: The Protein INteraction Dataset and Evaluation Resource☆148Updated last year
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆89Updated 2 years ago
- Papers about Structure-based Drug Design (SBDD)☆139Updated 5 months ago
- ☆41Updated 2 years ago
- Antibody-Antigen Docking and Affinity Benchmark☆76Updated 5 years ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆147Updated 9 months ago
- Code implementation of "Diffusion probabilistic modeling of protein backbones in 3D for the motif-scaffolding problem" https://arxiv.org/…☆74Updated 2 years ago