drorlab / gvpLinks
Geometric Vector Perceptron --- a rotation-equivariant GNN for learning from biomolecular structure
☆158Updated 4 years ago
Alternatives and similar repositories for gvp
Users that are interested in gvp are comparing it to the libraries listed below
Sorting:
- ☆228Updated 2 years ago
- Geometric Vector Perceptrons --- a rotation-equivariant GNN for learning from biomolecular structure☆308Updated this week
- Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)☆223Updated last year
- ☆130Updated 3 years ago
- EquiDock: geometric deep learning for fast rigid 3D protein-protein docking☆250Updated 2 years ago
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆108Updated last year
- ☆204Updated last year
- Database of Interacting Protein Structures (DIPS)☆102Updated last year
- ☆107Updated 2 years ago
- ☆133Updated 5 months ago
- Open source code for TankBind. Galixir Tenchnologies☆170Updated 2 years ago
- Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models …☆257Updated 6 months ago
- ☆42Updated 2 years ago
- Graph Network for protein-protein interface☆120Updated last year
- PINDER: The Protein INteraction Dataset and Evaluation Resource☆140Updated last year
- Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation☆125Updated 2 years ago
- The Enhanced Database of Interacting Protein Structures for Interface Prediction☆50Updated 2 months ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆121Updated 8 months ago
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆110Updated 2 years ago
- Comprehensive benchmarking of protein-ligand structure prediction methods. (ICML 2024 AI4Science)☆175Updated last week
- open source repository☆143Updated last year
- source code for https://arxiv.org/abs/2005.11248 "Accelerating Antimicrobial Discovery with Controllable Deep Generative Models and Molec…☆106Updated 2 months ago
- Generative Models for Graph-Based Protein Design☆280Updated 4 years ago
- Protein structure datasets for machine learning.☆112Updated 6 months ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆144Updated 7 months ago
- Antibody-Antigen Docking and Affinity Benchmark☆73Updated 5 years ago
- Dataset and package for working with protein-protein interactions in 3D☆96Updated 6 months ago
- Masif seed paper repository☆164Updated last month
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆88Updated last year
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆349Updated 2 years ago