drorlab / gvpLinks
Geometric Vector Perceptron --- a rotation-equivariant GNN for learning from biomolecular structure
☆148Updated 4 years ago
Alternatives and similar repositories for gvp
Users that are interested in gvp are comparing it to the libraries listed below
Sorting:
- ☆214Updated 2 years ago
- ☆129Updated 2 years ago
- Geometric Vector Perceptrons --- a rotation-equivariant GNN for learning from biomolecular structure☆288Updated 2 years ago
- EquiDock: geometric deep learning for fast rigid 3D protein-protein docking☆244Updated last year
- ☆106Updated 2 years ago
- ☆198Updated 10 months ago
- Database of Interacting Protein Structures (DIPS)☆102Updated last year
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆102Updated 10 months ago
- Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)☆212Updated last year
- open source repository☆139Updated last year
- The Enhanced Database of Interacting Protein Structures for Interface Prediction☆49Updated last year
- ☆130Updated last month
- NeurIPS 2024 Dataset and Benchmark Submission "AsEP: Benchmarking Deep Learning Methods for Antibody-specific Epitope Prediction"☆26Updated 11 months ago
- Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models …☆250Updated 3 months ago
- Generative Language Modeling for Antibody Design☆159Updated 10 months ago
- Open source code for TankBind. Galixir Tenchnologies☆161Updated last year
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆131Updated 3 months ago
- Antibody-Antigen Docking and Affinity Benchmark☆73Updated 4 years ago
- Generative Models for Graph-Based Protein Design☆278Updated 4 years ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆114Updated 5 months ago
- ☆40Updated last year
- Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation☆121Updated 2 years ago
- PINDER: The Protein INteraction Dataset and Evaluation Resource☆131Updated 8 months ago
- source code for https://arxiv.org/abs/2005.11248 "Accelerating Antimicrobial Discovery with Controllable Deep Generative Models and Molec…☆103Updated 2 years ago
- Masif seed paper repository☆156Updated 2 years ago
- Graph Network for protein-protein interface☆120Updated last year
- AbLang: A language model for antibodies☆144Updated last year
- Dataset and package for working with protein-protein interactions in 3D☆94Updated 3 months ago
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆77Updated last year
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆89Updated last year