Alternatives and similar repositories for Maverick

Users that are interested in Maverick are comparing it to the libraries listed below

• fredsanto / coverageMaster
  ☆12Updated last year
• rdemolgen / SavvySuite
  Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes
  ☆31Updated 4 months ago
• kensung-lab / INSurVeyor
  An insertion caller for Illumina paired-end WGS data.
  ☆23Updated 4 months ago
• monarch-initiative / SvAnna
  Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing
  ☆39Updated last month
• babelomics / SMAca
  SMN1 copy-number and sequence variant analysis from next generation sequencing data
  ☆23Updated last month
• Illumina / witty.er
  What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.
  ☆34Updated 2 years ago
• mquinodo / OFF-PEAK
  CNV detection tool for WES data
  ☆11Updated last year
• Illumina / GraphAlignmentViewer
  ☆35Updated 4 years ago
• niu-lab / msisensor-ct
  Microsatellite instability (MSI) detection for cfDNA samples.
  ☆20Updated 4 years ago
• dooguypapua / eKLIPse
  a tool for predicting mitochondrial DNA deletions using soft-clipping
  ☆23Updated 3 years ago
• liusihan / seGMM
  A new tool to infer sex from massively parallel sequencing data.
  ☆17Updated 7 months ago
• matheuscburger / Excavator2
  A fork of the project Excavator2 from sourceforge.
  ☆10Updated 8 years ago
• vicsanga / Postre
  POSTRE: Prediction Of STRuctural variant Effects
  ☆28Updated 10 months ago
• vpc-ccg / svict
  Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA
  ☆29Updated last year
• Illumina / Gauchian
  A variant caller for the GBA gene using WGS data
  ☆23Updated last year
• wdecoster / STRdust
  Tandem repeat genotyping from long reads
  ☆20Updated last week
• monarch-initiative / Squirls
  Interpretable prioritization of splice variants in diagnostic next-generation sequencing
  ☆18Updated last year
• SciLifeLab / TIDDIT
  TIDDIT - structural variant calling
  ☆78Updated 3 weeks ago
• SMD-Bioinformatics-Lund / gens
  ☆19Updated last week
• nspies / svviz2
  for visual evaluation of read support for structural variation
  ☆55Updated last year
• Genome-Bioinformatics-RadboudUMC / DeNovoCNN
  A deep learning approach to de novo variant calling in next generation sequencing data
  ☆21Updated 2 years ago
• rsemeraro / PyPore
  A python tool box for fast and accurate quality control, conversion and alignment of nanopore sequencing data
  ☆20Updated 3 years ago
• mccoy-lab / LD-PGTA
  Linkage disequlibrium-informed PGT-A (LD-PGTA). A package for detecting genotypic signatures of aneuploidy from extremely low-coverage se…
  ☆18Updated 3 years ago
• ShujiaHuang / basevar
  This is the official development repository for BaseVar, which call variants for large-scale ultra low-pass (<1.0x) WGS data, especially …
  ☆27Updated 5 months ago
• ISUgenomics / SequelTools
  new repo
  ☆28Updated 4 years ago
• Clinical-Genomics / stranger
  Tool to annotate outfiles from ExpansionHunter and TRGT with the pathologic implications of the repeat
  ☆37Updated 2 weeks ago
• Genotek / ClassifyCNV
  ClassifyCNV: a tool for clinical annotation of copy-number variants
  ☆69Updated 2 years ago
• TheJacksonLaboratory / SVE
  ☆51Updated 6 years ago
• DecodeGenetics / svimmer
  Structural variant merging tool
  ☆57Updated last year
• jzook / genome-data-integration
  Methods to integrate data from multiple genome sequencing datasets and form consensus variant calls
  ☆45Updated 3 years ago