☆18Oct 18, 2024Updated last year
Alternatives and similar repositories for bonsaitree
Users that are interested in bonsaitree are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R package for pedigree inference based on SNP data☆29Jan 4, 2026Updated 8 months ago
- Lossless VCF compression☆22Mar 4, 2022Updated 4 years ago
- genetic correlation between phenotypes in the UK biobank☆15Feb 22, 2024Updated 2 years ago
- Tools for working with pedigrees in R☆29Jun 29, 2026Updated 2 months ago
- AlphaImpute2: pedigree- and population-based genotype imputation☆15Aug 24, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A tool for discovering transposable elements and describing patterns of genome evolution☆32Apr 23, 2023Updated 3 years ago
- Utilities to detect and profile `het-kmers`☆12Aug 5, 2024Updated 2 years ago
- Learn and validate subtypes from multiple traits☆20Jun 15, 2021Updated 5 years ago
- Custom tools to 'facilitate' BioNano Genomics data analysis☆34Sep 15, 2026Updated last week
- Demographic inference from whole genomes☆13Oct 18, 2022Updated 3 years ago
- [Work in progress] A Rust implementation of the Louvain algorithm 🎈☆11Aug 16, 2023Updated 3 years ago
- C++ wrapper to tabix indexer☆18Jun 27, 2025Updated last year
- Estimate population history parameters from site pattern frequencies.☆13Aug 11, 2026Updated last month
- an R based software package that makes polygenic traits prediction using gradient boosted and LD adjusted gene score weights.☆10Apr 9, 2019Updated 7 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆28Mar 13, 2026Updated 6 months ago
- Examples of using CloudML with genomic data.☆18May 24, 2019Updated 7 years ago
- IndexTools is a toolkit for extremely fast NGS analysis based on index files.☆17Aug 19, 2022Updated 4 years ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆19Mar 5, 2019Updated 7 years ago
- Naive PCA for genotype data☆10Jul 27, 2016Updated 10 years ago
- Interface to various variant calling formats.☆32Apr 10, 2026Updated 5 months ago
- Identifying, understanding, and correcting technical biases on the sex chromosomes in next-generation sequencing data☆23Apr 11, 2019Updated 7 years ago
- Accurate and fast taxonomic classification using pseudoaligning☆21Sep 16, 2017Updated 9 years ago
- Processing WGS aDNA data using the ReichLab protocol☆13Mar 8, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆11Apr 3, 2023Updated 3 years ago
- Independent Hypothesis Weighting☆17Sep 25, 2023Updated 2 years ago
- Statistical GENetics Input/Output Functions☆19Feb 20, 2025Updated last year
- Genealogy plugin for Neo4j☆16Jul 3, 2023Updated 3 years ago
- CardiacProfileR: An R package for extraction and visualisation of heart rate profiles from wearable fitness trackers☆13Jun 10, 2018Updated 8 years ago
- Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data☆13Apr 18, 2019Updated 7 years ago
- Linear time detection of Identity by Descent☆13Jul 22, 2011Updated 15 years ago
- Pan gGnome Viewer☆10Updated this week
- semi-reference-based short read compression☆11Mar 5, 2019Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Pedigree simulator☆34Aug 1, 2026Updated last month
- Visualisation and prioritisation of genomic variants from human exome sequencing projects☆13Apr 23, 2019Updated 7 years ago
- Software for linkage disequilibrium graphical models☆18Apr 6, 2025Updated last year
- Scrooge is a high-performance pairwise sequence aligner based on the GenASM algorithm. Scrooge includes three novel algorithmic improveme…☆38Jun 23, 2023Updated 3 years ago
- A utility for merging and genotyping Illumina-style GVCFs.☆34Feb 26, 2019Updated 7 years ago
- A tool to detect postzygotic single-nucleotide mosaicism from unpaired, trio, or paired samples.☆13Feb 23, 2021Updated 5 years ago
- nimble aligner that will map your reads to the references on a laptop☆11Jun 29, 2017Updated 9 years ago