☆18Oct 18, 2024Updated 2 years ago
Alternatives and similar repositories for bonsaitree
Users that are interested in bonsaitree are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Resources related to Novembre et al (2008) Nature 456:98-101☆10Apr 25, 2016Updated 10 years ago
- R package for pedigree inference based on SNP data☆30Jan 4, 2026Updated 9 months ago
- AlphaImpute2: pedigree- and population-based genotype imputation☆15Aug 24, 2026Updated 2 months ago
- Lossless VCF compression☆22Mar 4, 2022Updated 4 years ago
- genetic correlation between phenotypes in the UK biobank☆15Feb 22, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Tools for working with pedigrees in R☆29Oct 16, 2026Updated 2 weeks ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆19Mar 5, 2019Updated 7 years ago
- CardiacProfileR: An R package for extraction and visualisation of heart rate profiles from wearable fitness trackers☆13Jun 10, 2018Updated 8 years ago
- Learn and validate subtypes from multiple traits☆20Jun 15, 2021Updated 5 years ago
- A tool for discovering transposable elements and describing patterns of genome evolution☆32Apr 23, 2023Updated 3 years ago
- Custom tools to 'facilitate' BioNano Genomics data analysis☆34Oct 21, 2026Updated last week
- Utilities to detect and profile `het-kmers`☆12Aug 5, 2024Updated 2 years ago
- Model-free inference of tree sequences from unphased genotypes☆13May 22, 2026Updated 5 months ago
- an R based software package that makes polygenic traits prediction using gradient boosted and LD adjusted gene score weights.☆10Apr 9, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Estimate population history parameters from site pattern frequencies.☆13Oct 17, 2026Updated 2 weeks ago
- Demographic inference from whole genomes☆13Oct 18, 2022Updated 4 years ago
- Translocator: local realignment and global remapping enabling accurate translocation detection using single-molecule sequencing long read…☆12Jan 22, 2020Updated 6 years ago
- Linear time detection of Identity by Descent☆13Jul 22, 2011Updated 15 years ago
- likelihood calculations over a tree to support ancient DNA Y chr analysis and more☆11Jul 4, 2023Updated 3 years ago
- C++ wrapper to tabix indexer☆18Jun 27, 2025Updated last year
- Examples of using CloudML with genomic data.☆18May 24, 2019Updated 7 years ago
- [Work in progress] A Rust implementation of the Louvain algorithm 🎈☆11Aug 16, 2023Updated 3 years ago
- Naive PCA for genotype data☆10Jul 27, 2016Updated 10 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- IndexTools is a toolkit for extremely fast NGS analysis based on index files.☆17Aug 19, 2022Updated 4 years ago
- semi-reference-based short read compression☆11Mar 5, 2019Updated 7 years ago
- Identifying, understanding, and correcting technical biases on the sex chromosomes in next-generation sequencing data☆23Apr 11, 2019Updated 7 years ago
- ☆10Oct 21, 2019Updated 7 years ago
- Accurate and fast taxonomic classification using pseudoaligning☆21Sep 16, 2017Updated 9 years ago
- ☆12May 13, 2024Updated 2 years ago
- Tools and Python API for GEDMatch Genesis (https://genesis.gedmatch.com)☆13Jan 29, 2022Updated 4 years ago
- Independent Hypothesis Weighting☆17Sep 25, 2023Updated 3 years ago
- Interface to various variant calling formats.☆32Apr 10, 2026Updated 6 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Statistical GENetics Input/Output Functions☆19Feb 20, 2025Updated last year
- Pan gGnome Viewer☆10Sep 24, 2026Updated last month
- Minimac3 is a low memory and computationally efficient implementation of the genotype imputation algorithms. Minimac3 is designed to hand…☆30Mar 28, 2022Updated 4 years ago
- LASSI-Plus: A program to calculate haplotype frequency spectrum statistics☆13Sep 29, 2026Updated last month
- Genealogy plugin for Neo4j☆16Jul 3, 2023Updated 3 years ago
- ☆28Mar 13, 2026Updated 7 months ago
- ☆11Apr 3, 2023Updated 3 years ago