Alternatives and similar repositories for cloudml-examples

Users that are interested in cloudml-examples are comparing it to the libraries listed below

• googlegenomics / gcp-variant-transforms
  GCP Variant Transforms
  ☆141Updated 6 months ago
• BauerLab / VariantSpark
  VariantSpark is a framework for applying Spark-based Machine Learning methods to whole-genome variant information
  ☆33Updated 8 years ago
• isb-cgc / examples-Python
  Analysis examples based on the ISB-CGC hosted TCGA data, using Python and IPython Notebooks.
  ☆54Updated 6 years ago
• bigdatagenomics / cannoli
  Distributed execution of bioinformatics tools on Apache Spark. Apache 2 licensed.
  ☆41Updated 10 months ago
• hammerlab / pageant
  Parallel Genomic Analysis Toolkit
  ☆14Updated 6 years ago
• verilylifesciences / variant-qc
  Quality control methods for human genomic variants.
  ☆62Updated 3 years ago
• bigdatagenomics / mango
  A scalable genome browser. Apache 2 licensed.
  ☆126Updated 3 years ago
• googlegenomics / variant-annotation
  Use cloud technology to annotate human sequence variants in parallel.
  ☆11Updated 4 years ago
• nfergu / popstrat
  Population Stratification Analysis on Genomics Data Using Deep Learning
  ☆25Updated 9 years ago
• googlegenomics / datalab-examples
  Example Cloud Datalab iPython Notebooks for genomics use cases.
  ☆25Updated 8 years ago
• Steven-N-Hart / VariantDB_Challenge
  Finding a scalable alternative to the VCF File for genomics analysis
  ☆14Updated 9 years ago
• aehrc / VariantSpark
  machine learning for genomic variants
  ☆147Updated last month
• googlegenomics / readthedocs
  Documentation for the Google Genomics cookbook.
  ☆141Updated 5 years ago
• ga4gh / htsget
  Python client for GA4GH htsget protocol
  ☆15Updated 3 years ago
• googlegenomics / htsget
  Open Source implementation of the GA4GH htsget protocol for objects stored in Google Cloud Storage
  ☆24Updated 6 years ago
• googlegenomics / pipelines-api-examples
  Examples for the Google Genomics Pipelines API.
  ☆50Updated 8 years ago
• iobio / minion
  Server wrapper that turns command line tools into web services
  ☆60Updated 7 years ago
• googlegenomics / pipelines-tools
  Tools for developing and running pipelines with the Genomics API
  ☆24Updated 6 years ago
• biobuilds / biobuilds
  Curated collection of open-source bioinformatics tools
  ☆28Updated 6 years ago
• Nealelab / cloudtools
  Scripts for working with Google Cloud Dataproc service
  ☆37Updated 6 years ago
• hammerlab / cohorts
  Utilities for analyzing mutations and neoepitopes in patient cohorts
  ☆20Updated 7 years ago
• googlegenomics / bigquery-examples
  Advanced BigQuery examples on genomic data.
  ☆88Updated 8 years ago
• iobio / bam.iobio.io
  https://bam.iobio.io
  ☆47Updated last week
• ga4gh-beacon / specification
  GA4GH Beacon specification.
  ☆33Updated 2 years ago
• hms-dbmi / hail-on-AWS-spot-instances
  An option to spin cost effective EMR clusters in AWS with Hail and JupyterNotebook installed
  ☆18Updated 5 years ago
• bigdatagenomics / eggo
  Ready-to-go Parquet-formatted public 'omics datasets
  ☆30Updated 10 years ago
• BD2KGenomics / toil-scripts
  Toil workflows for common genomic pipelines
  ☆33Updated 6 years ago
• EBISPOT / goci
  GWAS Catalog Ontology and Curation Infrastructure
  ☆26Updated last week
• phenopolis / phenopolis
  An Open Platform for Harmonisation & Analysis of Sequencing & Phenotype Data
  ☆33Updated 3 years ago
• ga4gh / ga4gh-server
  Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24
  ☆99Updated 7 years ago