magnusdv / pedtoolsLinks
Tools for working with pedigrees in R
☆28Updated this week
Alternatives and similar repositories for pedtools
Users that are interested in pedtools are comparing it to the libraries listed below
Sorting:
- Population-based detection of structural variation from High-Throughput Sequencing.☆33Updated 3 years ago
- PAnno is a Pharmacogenomics Annotation tool for clinical genomic testing.☆16Updated 3 years ago
- Tao Yan's Plot Toolkit☆12Updated 6 years ago
- Reducing reference bias using multiple population reference genomes☆34Updated last year
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated 2 months ago
- ☆11Updated 2 years ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 5 years ago
- A series of scripts to automate sequence workflows☆19Updated last week
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Updated 3 years ago
- Unfazed by genomic variant phasing☆27Updated last year
- UCSC liftOver (genome build converter) for vcf format☆12Updated 8 years ago
- ☆21Updated 3 years ago
- Runs a combination of tools to generate structural variant calls on short-read whole-genome sequencing data☆22Updated 4 years ago
- ☆29Updated 6 years ago
- Integrative analysis of structural variations.☆40Updated 2 years ago
- A webtool for the clinical interpretation of CNVs in rare disease patients☆13Updated 3 years ago
- Exhaustive capture of biological variation in RNA-seq data through k-mer decomposition.☆15Updated 7 years ago
- ☆46Updated 10 months ago
- Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment☆21Updated 3 months ago
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 7 years ago
- Expectation-Maximization algorithm for Allele-Specific Expression☆21Updated 2 years ago
- A toolkit for performing set operations - union, intersection and complement - on k-mer lists.☆34Updated 3 years ago
- Flexible Bayesian inference of mutational signatures☆38Updated 3 years ago
- Effective Computing—Resources for Computational Biologists☆27Updated 5 years ago
- Allele frequency filter app☆14Updated 3 years ago
- ☆23Updated 2 months ago
- The Genome U-Plot is a JavaScript tool to visualize chromosomal abnormalities in the Human Genome using a U-shape layout.☆32Updated 3 years ago
- Bedfile perturbation tool☆17Updated 4 months ago
- Interactive eQTL visualizations☆13Updated 3 years ago
- A set of tools to annotate VCF files with expression and readcount data☆30Updated 10 months ago