☆29Oct 16, 2024Updated last year
Alternatives and similar repositories for VCFshiny
Users that are interested in VCFshiny are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Galaxy on AWS Guidance provides all the infrastructure components required to run Galaxy in the cloud and are preconfigured with industry…☆19Feb 10, 2025Updated last year
- v2.x of the microassembly based somatic variant caller☆29May 31, 2026Updated last week
- Project code for BioHackathon Europe 2022.☆21Jan 10, 2024Updated 2 years ago
- Scripts and code for Kākāpō genomic data☆14Sep 4, 2023Updated 2 years ago
- Database-Integrated Genome Screening (DIGS) tool. Explore the dark genome using BLAST and a relational database.☆11Aug 25, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Powerful statistics for VCF files☆74Nov 16, 2025Updated 6 months ago
- R Shiny wrapper for Mol* (/'molstar/) - A visualization toolkit of large-scale molecular data☆19Jun 1, 2026Updated last week
- ☆12Apr 8, 2021Updated 5 years ago
- Sequencing analysis pipeline☆15Dec 12, 2025Updated 6 months ago
- Evaluation of cell-cell interaction methods by integrating single-cell RNA sequencing data with spatial information☆23Sep 30, 2022Updated 3 years ago
- ☆24May 9, 2026Updated last month
- Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research☆50May 21, 2026Updated 3 weeks ago
- ☆17Jan 29, 2026Updated 4 months ago
- ☆11Jul 3, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆18Nov 7, 2025Updated 7 months ago
- mutSignatures R package - updated (dev) version - 2.1.4☆14Jan 18, 2023Updated 3 years ago
- multiPhATE with comparative genomics☆18Jun 14, 2021Updated 4 years ago
- ☆27Jun 5, 2025Updated last year
- ☆12Sep 4, 2022Updated 3 years ago
- A repo to reproduce the experiments in the YACHT manuscript☆12Nov 2, 2023Updated 2 years ago
- visual analysis of your VCF files☆40Dec 3, 2022Updated 3 years ago
- A pipeline that accurately simulates high quality publicly cancer genomes (VCFs, CNAs and SVs).☆36Updated this week
- Base CRUK Cambridge Institute RNAseq Course☆21Aug 30, 2019Updated 6 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A set of tools to annotate VCF files with expression and readcount data☆30Jan 30, 2026Updated 4 months ago
- GPRuler, an open-source computational framework to automate the reconstruction process of Gene-Protein-Reaction (GPR) rules within metabo…☆13Oct 11, 2022Updated 3 years ago
- Notes and code from a network biology study group at UMD.☆10Apr 11, 2015Updated 11 years ago
- PhysiBoSS 2.0: a sustainable integration of stochastic Boolean and agent-based modelling frameworks☆34Jun 5, 2026Updated last week
- Automatic selection of number of principal components☆17Jun 27, 2022Updated 3 years ago
- Analyzing cellular niches in spatial transcriptomics data☆37Nov 18, 2024Updated last year
- Unzip assembly graphs with Hi-C data and/or long reads.☆28May 7, 2026Updated last month
- De novo VIral Genome Annotator☆24Jan 11, 2026Updated 5 months ago
- Automatic classification of sequence variants and CNVs according to ACMG criteria.☆30Sep 30, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Genome Assembly 102☆18Apr 23, 2025Updated last year
- Spring 2021 Short Course materials☆12Dec 2, 2024Updated last year
- BigSeqKit: a parallel Big Data toolkit to process FASTA and FASTQ files at scale☆59Aug 6, 2023Updated 2 years ago
- ☆12Apr 16, 2026Updated last month
- Nextflow pipeline to convert VCF files into MAF files.☆10Dec 12, 2025Updated 6 months ago
- Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.☆93Dec 18, 2024Updated last year
- Functional image processing☆17Oct 20, 2018Updated 7 years ago