bioinformatics-core-shared-training / CRUK_CI_RNAseq_course
Base CRUK Cambridge Institute RNAseq Course
☆21Updated 5 years ago
Alternatives and similar repositories for CRUK_CI_RNAseq_course:
Users that are interested in CRUK_CI_RNAseq_course are comparing it to the libraries listed below
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆35Updated 6 years ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆53Updated 4 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- ATAC-seq lab for BIOINF545☆25Updated this week
- Reference transcriptome indices build from kallisto for popular organisms☆42Updated last year
- ☆37Updated 4 years ago
- Summer school course materials collection☆25Updated 6 years ago
- Bioinformatics Workflows☆20Updated 4 years ago
- ATAC-seq Quality Control☆22Updated last month
- Repo for Physalia course Analysis of Single Cell RNA-Seq data☆31Updated 5 years ago
- Robust Allele Specific Quantification and quality controL☆39Updated 3 years ago
- A modular, containerized pipeline for ATAC-seq data processing☆55Updated last week
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem☆30Updated 6 years ago
- Code and additional processed data for manuscript "Tumor and Microenvironment Evolution during Immunotherapy with Nivolumab"; see for man…☆51Updated 7 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆73Updated this week
- ☆33Updated 5 years ago
- DCC/DAC methylation pipeline source☆55Updated 4 years ago
- Filtering of PDX samples for mouse derived reads☆26Updated 2 years ago
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆43Updated 3 years ago
- ☆33Updated 6 years ago
- Integrative pathway enrichment analysis of multivariate omics data☆105Updated 6 months ago
- Tutorials covering various topics in genomic data analysis.☆16Updated 6 years ago
- Bioconductor package esATAC: an Easy-to-use Systematic pipeline for ATAC-seq data analysis☆23Updated 2 years ago
- CLIP-seq Analysis of Multi-mapped reads☆29Updated 3 years ago
- ☆8Updated 5 years ago
- BRIE: Bayesian Regression for Isoform Estimate in Single Cells☆42Updated 8 months ago
- documentation for trackViewer☆29Updated 5 years ago
- Tutorial for AMSI BioInfoSummer 2018☆29Updated 6 years ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆76Updated 2 years ago