bioinformatics-core-shared-training / CRUK_CI_RNAseq_courseView external linksLinks
Base CRUK Cambridge Institute RNAseq Course
☆21Aug 30, 2019Updated 6 years ago
Alternatives and similar repositories for CRUK_CI_RNAseq_course
Users that are interested in CRUK_CI_RNAseq_course are comparing it to the libraries listed below
Sorting:
- Summer school course materials collection☆27Aug 8, 2018Updated 7 years ago
- Codes for our paper "Single-Cell RNA-Seq Reveals Dynamic Early Embryonic-like Programs during Chemical Reprogramming" published by Cell S…☆11Sep 5, 2020Updated 5 years ago
- Repel Visually Similar Colors for Colorblind Users (CRAN)☆10Jul 21, 2025Updated 6 months ago
- Project bulk/single-cell RNA-seq data to given LSI space☆11Jan 17, 2022Updated 4 years ago
- Efficiently compute robust markers across single-cell datasets☆12Apr 21, 2021Updated 4 years ago
- Querying cellular states and programs by learning representations of gene sets☆15Nov 2, 2025Updated 3 months ago
- Convert your single-cell/spatial analyses to parallel HPC/cloud workflows just using pipes in R☆16Dec 18, 2024Updated last year
- Script to automate differential expression analysis using DESeq2, edgeR or limma-voom☆20Aug 22, 2018Updated 7 years ago
- RNAseq Data Analysis Course, Cambridge University Bioinformatics Training Facility, September 2019☆16Nov 22, 2019Updated 6 years ago
- ☆17Jun 5, 2019Updated 6 years ago
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Jan 25, 2022Updated 4 years ago
- Comprehensive pipeline for donor demultiplexing in single cell☆24Updated this week
- Robustness and applicability of transcription factor and pathway analysis tools on single-cell RNA-seq data☆28Mar 2, 2020Updated 5 years ago
- ☆29Oct 16, 2024Updated last year
- Data and code for the paper "Developmental diversification of cortical inhibitory interneurons"☆24Dec 20, 2018Updated 7 years ago
- Scripts related to VISp and ALM scRNA-seq and FISH analysis for Tasic, et al., 2018.☆24Jun 15, 2018Updated 7 years ago
- An R implementation of the SINCERA pipeline for single cell RNA-seq profiling analysis☆27Jan 27, 2021Updated 5 years ago
- A portable and fast single cell type identifier☆63May 12, 2021Updated 4 years ago
- ☆14Jul 1, 2025Updated 7 months ago
- anor: an annotation and visualization system based on R and Shiny framework☆33Apr 20, 2020Updated 5 years ago
- R package for detection of cell-cell interaction using Non-negative Tensor Decomposition☆34Jun 19, 2025Updated 7 months ago
- Online Homework Management System☆31Mar 27, 2016Updated 9 years ago
- Six hour hands-on to creating publication-quality plots in R☆42Oct 26, 2023Updated 2 years ago
- Classification of Single cells by Transfer Learning☆10Oct 11, 2025Updated 4 months ago
- An R package for climate data post-processing (part of the climate4R bundle)☆12Jan 21, 2026Updated 3 weeks ago
- Animal Network Toolkit Software R package source code☆10Sep 21, 2023Updated 2 years ago
- 生物信息学的画图代码☆12Apr 11, 2023Updated 2 years ago
- A toolkit to bulk-submission, download, analysis and summarizing data from abYsis.org☆10Apr 20, 2020Updated 5 years ago
- ☆10May 17, 2017Updated 8 years ago
- A DL-based framework for sequence and shape motif identification in the human genome☆11May 26, 2023Updated 2 years ago
- An interpretable and flexible deep learning framework for single-T cell transcriptome and receptor analysis☆14Apr 5, 2025Updated 10 months ago
- ChIP-seq and ATAC-seq analysis☆13Jun 17, 2024Updated last year
- FASTAptamer: A Bioinformatic Toolkit for High-Throughput Sequence Analysis of Combinatorial Selections☆10Oct 7, 2024Updated last year
- This project attempts to model and acquire data from SF OpenData - and other sources - to predict the relative risk of fire in San Franci…☆10Jun 21, 2018Updated 7 years ago
- Advanced R 1-day course taught at the University of Cambridge☆11Jul 6, 2018Updated 7 years ago
- The Dockerfiles for breeDBase☆12Updated this week
- ☆13Nov 13, 2023Updated 2 years ago
- 在R语言中使用ChatGPT(中国大陆版)☆12Mar 17, 2023Updated 2 years ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆37Mar 15, 2023Updated 2 years ago