bioinformatics-core-shared-training / CRUK_CI_RNAseq_course
Base CRUK Cambridge Institute RNAseq Course
☆21Updated 5 years ago
Alternatives and similar repositories for CRUK_CI_RNAseq_course:
Users that are interested in CRUK_CI_RNAseq_course are comparing it to the libraries listed below
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- ATAC-seq lab for BIOINF545☆25Updated 2 months ago
- Reference transcriptome indices build from kallisto for popular organisms☆42Updated last year
- ☆38Updated 5 years ago
- A toolkit for QC and visualization of ATAC-seq results.☆68Updated 3 months ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆54Updated 4 years ago
- Repo for Physalia course Analysis of Single Cell RNA-Seq data☆32Updated 5 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆75Updated last month
- ATAC-seq processing pipeline☆32Updated 3 years ago
- Robust Allele Specific Quantification and quality controL☆39Updated 3 years ago
- Tutorial for AMSI BioInfoSummer 2018☆29Updated 6 years ago
- Workshop • Analysis of RNA-seq data☆35Updated last year
- Integrative analysis pipeline for pooled CRISPR functional genetic screens☆30Updated last year
- A modular, containerized pipeline for ATAC-seq data processing☆56Updated 3 weeks ago
- DCC/DAC methylation pipeline source☆55Updated 4 years ago
- Code and additional processed data for manuscript "Tumor and Microenvironment Evolution during Immunotherapy with Nivolumab"; see for man…☆51Updated 7 years ago
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆62Updated 4 years ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆36Updated 6 years ago
- Tutorials covering various topics in genomic data analysis.☆16Updated 6 years ago
- Integrative pathway enrichment analysis of multivariate omics data☆108Updated 8 months ago
- Filtering of PDX samples for mouse derived reads☆27Updated 2 years ago
- Summer school course materials collection☆25Updated 6 years ago
- ATAC-seq Quality Control☆23Updated 3 months ago
- ☆30Updated 6 years ago
- Bioconductor package esATAC: an Easy-to-use Systematic pipeline for ATAC-seq data analysis☆23Updated 2 years ago
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Updated 4 years ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 2 years ago
- ☆16Updated 6 years ago
- CLIP-seq Analysis of Multi-mapped reads☆30Updated 3 years ago
- A Spike-in Free ChIP-Seq Normalization Approach for Detecting Global Changes in Histone Modifications☆32Updated 3 years ago