diegommcc / digitalDLSorteRLinks
digitalDLSorteR: An R package to deconvolute bulk RNA-Seq using scRNA-Seq data
☆14Updated 11 months ago
Alternatives and similar repositories for digitalDLSorteR
Users that are interested in digitalDLSorteR are comparing it to the libraries listed below
Sorting:
- Core utilities for single-cell RNA-seq☆12Updated 6 months ago
- Gene-level general linear mixed model☆23Updated last week
- ☆25Updated 4 months ago
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆22Updated 4 years ago
- R functions underlying OmicsNet☆20Updated last month
- ☆28Updated last year
- A Tidy Framework to Hack Gene Expression Signatures☆19Updated 5 months ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆32Updated 4 years ago
- Single Cell multimodal data scripts for downloading datasets☆17Updated 4 months ago
- Prioritizing Cancer Driver Genes Using Genomics Data☆17Updated 2 years ago
- cross-species analysis of cell identities, markers and regulations☆12Updated 3 months ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Updated 2 years ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆28Updated 2 years ago
- R package to do enrichment analysis for neoantigens☆12Updated 3 years ago
- BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses☆22Updated 4 years ago
- Multi-omics data normalisation, model fitting and visualisation.☆28Updated 2 years ago
- R package☆22Updated last year
- A General Framework for Consensus Partitioning☆63Updated 8 months ago
- Tools for assessing clustering robustness☆25Updated last month
- Explore the cancer relevance of your gene list☆52Updated 3 weeks ago
- ☆12Updated 7 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆37Updated 6 months ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- ☆16Updated 6 months ago
- An R Package for Geneset Enrichment Workflows☆76Updated 3 weeks ago
- Bayesian modelling of DNA methylation heterogeneity at single-cell resolution☆23Updated last year
- A common data format and inference environment for single-cell trajectories 📦☆17Updated 2 years ago
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆29Updated 6 years ago
- Batch Correction and Adaptive Contrast Calling in Complex RNA-seq Experimental Designs Using DESeq2☆16Updated last week
- The R/Python scripts for the analysis of single-cell RNA-seq data from COVID-19 patients☆10Updated 4 years ago