diegommcc / digitalDLSorteRLinks
digitalDLSorteR: An R package to deconvolute bulk RNA-Seq using scRNA-Seq data
☆14Updated last year
Alternatives and similar repositories for digitalDLSorteR
Users that are interested in digitalDLSorteR are comparing it to the libraries listed below
Sorting:
- Core utilities for single-cell RNA-seq☆12Updated 6 months ago
- ☆25Updated 4 months ago
- Gene-level general linear mixed model☆23Updated last month
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆22Updated 4 years ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆28Updated 2 years ago
- Prioritizing Cancer Driver Genes Using Genomics Data☆17Updated 2 years ago
- Use batch balanced KNN (BBKNN) in R☆12Updated last month
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆32Updated 4 years ago
- R package☆21Updated last year
- Multi-omics data normalisation, model fitting and visualisation.☆28Updated 2 years ago
- ☆16Updated 7 months ago
- A General Framework for Consensus Partitioning☆63Updated 8 months ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆39Updated 6 months ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Updated 2 years ago
- A Tidy Framework to Hack Gene Expression Signatures☆19Updated 6 months ago
- An R package for visualising cell-cell interactions☆43Updated last year
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆47Updated 2 years ago
- cross-species analysis of cell identities, markers and regulations☆12Updated 3 months ago
- ☆31Updated 5 years ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆57Updated last year
- Tools for assessing clustering robustness☆28Updated last month
- R functions underlying OmicsNet☆20Updated last month
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- The R/Python scripts for the analysis of single-cell RNA-seq data from COVID-19 patients☆10Updated 4 years ago
- BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses☆22Updated 4 years ago
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆29Updated 6 years ago
- ☆28Updated last year
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆31Updated 2 months ago
- An R Package for Geneset Enrichment Workflows☆76Updated last month
- CellAnn☆12Updated 2 years ago