kjgleason / PrimoView external linksLinks
Primo
☆16Sep 2, 2021Updated 4 years ago
Alternatives and similar repositories for Primo
Users that are interested in Primo are comparing it to the libraries listed below
Sorting:
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆14Dec 23, 2022Updated 3 years ago
- Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)☆10Jan 26, 2026Updated 2 weeks ago
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆21Aug 19, 2025Updated 5 months ago
- Create LocusZoom-style plots in R.☆22Mar 5, 2023Updated 2 years ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆28Jul 30, 2025Updated 6 months ago
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆43Jan 20, 2023Updated 3 years ago
- Visualization of Colocalization Between eQTL and GWAS Data☆87May 13, 2022Updated 3 years ago
- Convert GWAS sumstat files into a common format with a common reference for positions, rsids and effect alleles.☆24Sep 4, 2025Updated 5 months ago
- Colocalisation pipeline for Open Targets Genetics☆17Apr 8, 2022Updated 3 years ago
- QTL Discovery using Annotations☆28Dec 12, 2022Updated 3 years ago
- Pleiotropy-informed conditional and conjunctional false discovery rate☆36Jun 3, 2025Updated 8 months ago
- Integration of TWAS and Colocalization Analysis☆17Oct 29, 2024Updated last year
- ☆18Sep 20, 2021Updated 4 years ago
- ☆16Dec 7, 2020Updated 5 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆35Aug 28, 2020Updated 5 years ago
- MetaXcan software and manuscript☆186Jul 4, 2025Updated 7 months ago
- Hypothesis Prioritisation in multi-trait Colocalization☆55Apr 8, 2024Updated last year
- Fast API server for calculating linkage disequilibrium☆20Apr 24, 2025Updated 9 months ago
- Fast, integrative fine mapping with functional data☆61Aug 22, 2019Updated 6 years ago
- ☆21Jul 25, 2023Updated 2 years ago
- Pair-wise conditional analysis and colocalisation☆42May 2, 2024Updated last year
- Doubly-Ranked Stratification in Mendelian Randomization☆11Jan 10, 2026Updated last month
- ☆10Jan 20, 2023Updated 3 years ago
- Upgrade to coloc☆13Aug 1, 2018Updated 7 years ago
- New version of mpMap☆12Jul 19, 2020Updated 5 years ago
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆35Sep 26, 2024Updated last year
- CELLEX (CELL-type EXpression-specificity)☆43Jun 2, 2023Updated 2 years ago
- Leveraging functional information to improve GWAS summary statistic imputation☆19Aug 10, 2021Updated 4 years ago
- ☆27Aug 20, 2020Updated 5 years ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Jun 27, 2023Updated 2 years ago
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 5 years ago
- ☆11Mar 16, 2022Updated 3 years ago
- EXpression PREdiction with Summary Statistics Only☆13Dec 10, 2025Updated 2 months ago
- ☆11Oct 14, 2022Updated 3 years ago
- Code to reproduce analysis and figures for 'Genetic mapping of etiologic brain cell types for obesity' (Timshel, eLife 2020)☆14May 20, 2021Updated 4 years ago
- Effective Computing—Resources for Computational Biologists☆27Apr 17, 2020Updated 5 years ago
- Manhattan++☆28Feb 13, 2024Updated 2 years ago
- A GWAS fine-mapping pipeline used in CAUSALdb☆27May 1, 2022Updated 3 years ago
- UChicago BSD Quantitative Bootcamp 2020☆11Sep 1, 2021Updated 4 years ago