Alternatives and similar repositories for cause

Users that are interested in cause are comparing it to the libraries listed below

• jrs95 / hyprcoloc
  Hypothesis Prioritisation in multi-trait Colocalization
  ☆55Updated last year
• cnfoley / hyprcoloc
  R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data
  ☆57Updated 4 years ago
• jwr-git / pwcoco
  Pair-wise conditional analysis and colocalisation
  ☆41Updated last year
• MRCIEU / MRInstruments
  Data objects for various sets of instruments
  ☆47Updated 5 years ago
• mglev1n / ldscr
  LD Score Regression in R
  ☆51Updated 4 months ago
• RayDebashree / PLACO
  A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics
  ☆37Updated 3 months ago
• n-mounier / MRlap
  R package to perform two-sample Mendelian Randomisation (MR) analyses using (potentially) overlapping samples
  ☆67Updated 11 months ago
• WSpiller / MVMR
  MVMR R Package
  ☆52Updated last month
• jingshuw / GRAPPLE
  An R package for Mendelian Randomization
  ☆39Updated last year
• josefin-werme / LAVA
  ☆78Updated last month
• kn3in / mRnd
  Power calculations for Mendelian Randomisation
  ☆24Updated 8 years ago
• rondolab / MR-PRESSO
  Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.
  ☆95Updated 2 years ago
• dingruofan / xQTLbiolinks
  xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs
  ☆37Updated 10 months ago
• explodecomputer / plinkbinr
  R package that contains plink binaries for windows, mac and linux
  ☆14Updated 6 years ago
• mancusolab / ma-focus
  MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets
  ☆38Updated last year
• WenjianBI / SPACox
  GWAS for survival analysis in large cohorts
  ☆22Updated last year
• eleanorsanderson / MediationMR
  ☆26Updated 5 years ago
• remlapmot / OneSampleMR
  R package of useful functions for one-sample Mendelian randomization and instrumental variable analyses
  ☆24Updated last month
• precimed / python_convert
  A collection of various utilities for GWAS summary statistics
  ☆32Updated last year
• huwenboshi / hess
  Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.
  ☆42Updated 7 years ago
• LizaDarrous / lhcMR
  lhcMR
  ☆26Updated last year
• gqi / MRMix
  R package for performing Mendelian Randomization using mixture models
  ☆25Updated 5 years ago
• JonSulc / PolyMR
  Polynomial Mendelian randomization for the inference of non-linear causal effects
  ☆14Updated 2 years ago
• qlu-lab / SUPERGNOVA
  ☆30Updated 4 years ago
• gamazonlab / MR-JTI
  ☆57Updated 11 months ago
• MRCIEU / gwasglue2
  Connecting GWAS summary data to analytical tools
  ☆23Updated last year
• rhhao / csMR
  Perform cell-stratified MR analysis through integrating GWAS and QTL data
  ☆35Updated 5 months ago
• mkanai / ldsc-corrplot-rg
  corrplot of LDSC genetic correlation results
  ☆56Updated 3 years ago
• cran / MendelianRandomization
   This is a read-only mirror of the CRAN R package repository. MendelianRandomization — Mendelian Randomization Package
  ☆45Updated last year
• amymariemason / SUMnlmr
  non-linear MR for semi-summarized data
  ☆23Updated last year