ChromBERT: A pre-trained foundation model for context-specific transcription regulatory network
☆22Mar 24, 2026Updated 3 weeks ago
Alternatives and similar repositories for ChromBERT
Users that are interested in ChromBERT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ChromBERT: A pre-trained foundation model for context-specific transcription regulatory network☆14Mar 24, 2026Updated 3 weeks ago
- ☆15Sep 14, 2021Updated 4 years ago
- A toolkit for analyzing architectural stripes☆20Dec 1, 2024Updated last year
- A versatile single-cell cross-modality translation method via dual-aligned variational autoencoders☆28Jul 1, 2024Updated last year
- ☆17Sep 16, 2021Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ChIP-seq DC and QC Pipeline☆36Mar 19, 2021Updated 5 years ago
- A machine-learning algorithm to predict CTCF-mediated long-range chromatin interactions☆17Nov 7, 2018Updated 7 years ago
- Long disorder consensus predictor☆22Sep 2, 2025Updated 7 months ago
- SIMBA: SIngle-cell eMBedding Along with features☆20Jan 6, 2026Updated 3 months ago
- Noise learning for Raman microscopy☆13Dec 15, 2023Updated 2 years ago
- Supplementary files and notebooks to recreate figures.☆21Aug 12, 2025Updated 8 months ago
- A deep-learning framework for multi-omics integration☆32Jul 6, 2023Updated 2 years ago
- Analyze 3'UTR usage in single-cell data.☆15Sep 25, 2021Updated 4 years ago
- ☆34Apr 15, 2025Updated 11 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Code for "Feature selection methods affect the performance of scRNA-seq data integration and querying"☆31Mar 15, 2025Updated last year
- DeePhase predictor of homotypic liquid-liquid phase separation of proteins & the code associated with the paper "Learning the molecular g…☆20Dec 30, 2021Updated 4 years ago
- A Nextflow pipeline for genome and pan-genome annotation☆16Feb 22, 2026Updated last month
- ☆114Dec 31, 2025Updated 3 months ago
- Library to extract embeddings for DNA sequences using BioFM genomics foundation model☆19Aug 13, 2025Updated 8 months ago
- BLAST-Like Alignment Tool☆23Jan 11, 2019Updated 7 years ago
- PanGenome Graph Building with the first 100 assemblies from the 1000G ONT Sequencing Consortium☆12Apr 5, 2025Updated last year
- EpiGePT: a pretrained transformer-based language model for context-specific human epigenomics☆33Jun 22, 2025Updated 9 months ago
- Single cell ANANSE Gene-regulatory-network analysis from Seurat objects☆10Nov 12, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Bulk (CP/GZ) and single-cell Iso-Seq in the developing human brain☆16May 30, 2024Updated last year
- ☆17Feb 15, 2026Updated last month
- A multi-thread tool for identifying DNA methylation motifs from Pacbio reads☆11Mar 7, 2018Updated 8 years ago
- ☆19Aug 29, 2025Updated 7 months ago
- Haplotype-aware assembly of complex regions and small genomes☆15Nov 21, 2025Updated 4 months ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆30Dec 3, 2024Updated last year
- ☆13Sep 14, 2021Updated 4 years ago
- ☆32Jul 29, 2025Updated 8 months ago
- JBrowse 2 plugin for editing annotations on an Apollo server☆15Apr 7, 2026Updated last week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Set of tools to manipulate and visualize modified base bam files☆59Aug 2, 2022Updated 3 years ago
- ☆12Nov 9, 2020Updated 5 years ago
- The main repository for ACTIVA: realistic single-cell RNA-seq generation with automatic cell-type identification using introspective vari…☆10Jan 23, 2023Updated 3 years ago
- chia pet analysis software☆25Jan 17, 2019Updated 7 years ago
- ☆15Oct 17, 2024Updated last year
- JanusDNA☆27Mar 19, 2026Updated 3 weeks ago
- Population genetics analysis on VG☆17Apr 22, 2021Updated 4 years ago