yuch7 / cwlexecLinks
A new open source tool to run CWL workflows on LSF
☆37Updated 2 years ago
Alternatives and similar repositories for cwlexec
Users that are interested in cwlexec are comparing it to the libraries listed below
Sorting:
- ☆91Updated last week
- Python utilities for CWL☆40Updated 2 weeks ago
- A translator from WDL to CWL v1.2☆27Updated 2 weeks ago
- The WES API is a standard way to run and manage portable workflows.☆85Updated last month
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆24Updated last month
- DRMAA for Slurm: Implementation of the DRMAA C bindings for Slurm☆49Updated 5 months ago
- Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows☆36Updated 3 weeks ago
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆27Updated 9 months ago
- An app store for scientific workflows, tools, notebooks, and services☆130Updated last week
- Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training m…☆95Updated last week
- GA4GH Task Execution Service Root Project + Deployment scripts on Kubernetes☆43Updated 7 months ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 7 years ago
- Accumulating container resource usage with workflow metadata☆19Updated 4 years ago
- Minimal setup required to run Galaxy under Kubernetes☆43Updated this week
- IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.☆15Updated 2 years ago
- Create cwl workflows by writing a simple Python script☆40Updated 5 years ago
- StreamFlow Workflow Manager☆58Updated this week
- biotoolsSchema : Tool description data model for computational tools in life sciences☆39Updated last year
- A collection of cwl-ica workflows along with a user guide for the commands to use and contributions guide☆11Updated this week
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆20Updated 2 years ago
- APIs for discovering genomics tools, their metadata and their containers☆31Updated last week
- Workflow Description Language developer tools & local runner☆193Updated 2 weeks ago
- Common Workflow Language reference implementation☆351Updated last week
- An open-source, cloud-ready web application for simplified deployment of big data workflows.☆33Updated 3 months ago
- Framework for testing CWL tools and workflows☆17Updated 2 weeks ago
- Butler is a framework for running scientific workflows on public and academic clouds.☆69Updated 5 years ago
- CWL CommandLineTool descriptions for biology/life-sciences related applications☆79Updated 5 months ago
- Workflow Execution Service Backend☆18Updated last week
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 3 years ago
- Reads the output from CLI help commands, and generates machine readable schemas (CWL etc)☆15Updated 4 years ago