yuch7 / cwlexecLinks
A new open source tool to run CWL workflows on LSF
☆37Updated 3 years ago
Alternatives and similar repositories for cwlexec
Users that are interested in cwlexec are comparing it to the libraries listed below
Sorting:
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆24Updated 4 months ago
- Python utilities for CWL☆40Updated last week
- ☆92Updated 2 months ago
- Framework for testing CWL tools and workflows☆19Updated last week
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆27Updated last year
- The WES API is a standard way to run and manage portable workflows.☆85Updated last month
- GA4GH Task Execution Service Root Project + Deployment scripts on Kubernetes☆43Updated 10 months ago
- An app store for scientific workflows, tools, notebooks, and services☆130Updated this week
- Workflow Execution Service Backend☆20Updated last week
- CWL CommandLineTool descriptions for biology/life-sciences related applications☆78Updated 8 months ago
- Minimal setup required to run Galaxy under Kubernetes☆43Updated 3 weeks ago
- Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows☆36Updated last week
- DRMAA for Slurm: Implementation of the DRMAA C bindings for Slurm☆49Updated 2 months ago
- Create cwl workflows by writing a simple Python script☆40Updated 5 years ago
- A translator from WDL to CWL v1.2☆27Updated last week
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 7 years ago
- biotoolsSchema : Tool description data model for computational tools in life sciences☆39Updated this week
- Common Workflow Language reference implementation☆358Updated this week
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆21Updated 3 years ago
- Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training m…☆95Updated last week
- Workflow Description Language developer tools & local runner☆200Updated 3 weeks ago
- An open-source, cloud-ready web application for simplified deployment of big data workflows.☆34Updated 6 months ago
- A collection of cwl-ica workflows along with a user guide for the commands to use and contributions guide☆13Updated last month
- StreamFlow Workflow Manager☆61Updated last week
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 4 years ago
- Trigger CWL workflows via GA4GH WES and TES☆17Updated this week
- APIs for discovering genomics tools, their metadata and their containers☆32Updated 3 months ago
- Seven Bridges Python library for programatic generation of CWL workflows.☆20Updated 3 years ago
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆44Updated 2 years ago
- Generating tool descriptors from bio.tools☆10Updated 7 years ago