alpha-unito / streamflow

Related projects ⓘ

Alternatives and complementary repositories for streamflow

• common-workflow-language / cwl-utils
  Python utilities for CWL
  ☆36Updated this week
• common-workflow-language / cwl-v1.2
  Released CWL v1.2.1 specification
  ☆34Updated last week
• ga4gh / workflow-execution-service-schemas
  The WES API is a standard way to run and manage portable workflows.
  ☆82Updated last month
• NLeSC / scriptcwl
  Create cwl workflows by writing a simple Python script
  ☆40Updated 4 years ago
• Duke-GCB / calrissian
  CWL on Kubernetes
  ☆44Updated 6 months ago
• ga4gh / task-execution-schemas
  ☆82Updated last week
• rabix / benten
  A language server for Common Workflow Language
  ☆67Updated 11 months ago
• hexylena / argparse2tool
  transparently build CWL and Galaxy XML tool definitions for any script that uses argparse
  ☆27Updated 2 weeks ago
• yuch7 / cwlexec
  A new open source tool to run CWL workflows on LSF
  ☆36Updated last year
• inab / WfExS-backend
  Workflow Execution Service Backend
  ☆17Updated 3 weeks ago
• ResearchObject / ro-crate-py
  Python library for RO-Crate
  ☆49Updated last week
• common-workflow-language / workflow-service
  Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows
  ☆36Updated 4 months ago
• common-workflow-lab / ipython2cwl
  IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.
  ☆15Updated 2 years ago
• common-workflow-lab / python-cwlgen
  Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement
  ☆29Updated 4 years ago
• common-workflow-lab / wdl-cwl-translator
  A translator from WDL to CWL v1.2
  ☆26Updated this week
• common-workflow-library / cwl-patterns
  Patterns commonly encountered when writing CWL workflows
  ☆26Updated 2 years ago
• workflux / workflUX
  An open-source, cloud-ready web application for simplified deployment of big data workflows.
  ☆33Updated 4 months ago
• vsoch / scif
  scientific filesystem: a filesystem organization for scientific software and metadata
  ☆32Updated 9 months ago
• common-workflow-language / cwlprov
  Profile for provenance research object of a CWL workflow run
  ☆17Updated last year
• DataBiosphere / job-manager
  Job Manager API and UI for interacting with asynchronous batch jobs and workflows.
  ☆26Updated 4 months ago
• common-workflow-language / user_guide
  The CWL v1.0 - v1.2 user guide
  ☆42Updated last month
• ohsu-comp-bio / cwl-tes
  cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.
  ☆18Updated last year
• common-workflow-language / cwlviewer
  A web application to view and share Common Workflow Language workflows
  ☆45Updated this week
• workflowhub-eu / about
  Website about the project WorkflowHub
  ☆11Updated last week
• BD2KGenomics / cgcloud
  Image and VM management for Jenkins, Spark and Mesos clusters in EC2
  ☆22Updated 4 years ago
• singularityhub / singularity-compose
  orchestration for singularity containers (under development)
  ☆72Updated 6 months ago
• pygridtools / drmaa-python
  Python wrapper around the C DRMAA library.
  ☆109Updated 5 years ago
• natefoo / slurm-drmaa
  DRMAA for Slurm: Implementation of the DRMAA C bindings for Slurm
  ☆49Updated last month
• nebari-dev / nebari-slurm
  An opinionated open source deployment of jupyterhub based on an Slurm job scheduler.
  ☆28Updated last month
• singularityhub / singularity-deploy
  Build and deploy Singularity containers to GitHub releases, and pull with the singularity-hpc client
  ☆16Updated last year