rabix / benten
A language server for Common Workflow Language
☆67Updated last year
Alternatives and similar repositories for benten:
Users that are interested in benten are comparing it to the libraries listed below
- Python utilities for CWL☆37Updated 2 weeks ago
- Released CWL v1.2.1 specification☆35Updated last month
- Patterns commonly encountered when writing CWL workflows☆26Updated 2 years ago
- The CWL v1.0 - v1.2 user guide☆42Updated 2 months ago
- A translator from WDL to CWL v1.2☆26Updated 2 weeks ago
- The WES API is a standard way to run and manage portable workflows.☆82Updated 3 months ago
- Create cwl workflows by writing a simple Python script☆40Updated 4 years ago
- A web application to view and share Common Workflow Language workflows☆46Updated this week
- An open-source, cloud-ready web application for simplified deployment of big data workflows.☆33Updated 6 months ago
- Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows☆36Updated 6 months ago
- Workflow Description Language compiler for the DNAnexus platform☆40Updated last year
- WDL plugin for pytest☆48Updated last year
- Workflow Description Language developer tools & local runner☆180Updated 5 months ago
- Job Manager API and UI for interacting with asynchronous batch jobs and workflows.☆26Updated last week
- www.commonwl.org☆10Updated 2 months ago
- Framework for testing CWL tools and workflows☆17Updated 2 weeks ago
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆26Updated 2 months ago
- ☆82Updated 2 months ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆21Updated last week
- Python and Rust library for loading, saving, and manipulating taxonomic trees☆36Updated 2 months ago
- Rich IDE support for Workflow Description Language☆42Updated 6 months ago
- Build and maintain multiple custom conda environments all in one place.☆37Updated last month
- Monitor computational workflows in real time☆69Updated 7 months ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 6 years ago
- StreamFlow Workflow Manager☆55Updated this week
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated 5 months ago
- CWL on Kubernetes☆46Updated last month
- deploy a snakemake pipeline directly from version control (under development)☆21Updated last month
- Workflow Execution Service Backend☆18Updated this week
- The snakemake interface, currently works like a notebook (under development)☆18Updated 3 years ago