DataBiosphere / job-manager
Job Manager API and UI for interacting with asynchronous batch jobs and workflows.
☆26Updated 4 months ago
Related projects ⓘ
Alternatives and complementary repositories for job-manager
- Workflow Description Language compiler for the DNAnexus platform☆40Updated last year
- The WES API is a standard way to run and manage portable workflows.☆82Updated last month
- APIs for discovering genomics tools, their metadata and their containers☆30Updated 3 weeks ago
- ☆82Updated last week
- Server wrapper that turns command line tools into web services☆60Updated 6 years ago
- Home of the Genomic Feature and Variation Ontology (GFVO)☆16Updated 3 years ago
- Core consonance utilities for scheduling, reporting on, and provisioning VMs for workflows☆14Updated 6 years ago
- Python client for GA4GH htsget protocol☆15Updated 2 years ago
- WDL tools for parsing, type-checking, and more☆25Updated 3 months ago
- Butler is a framework for running scientific workflows on public and academic clouds.☆69Updated 4 years ago
- GA4GH Variation Representation Python Implementation☆51Updated this week
- An open-source, cloud-ready web application for simplified deployment of big data workflows.☆33Updated 4 months ago
- ☆11Updated 8 years ago
- A repository for the schemas used for the Data Repository Service.☆60Updated last week
- WDL plugin for pytest☆48Updated last year
- Feature Annotation Location Description Ontology☆34Updated 4 years ago
- conda recipes for genomic data☆85Updated 3 years ago
- Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…☆70Updated 3 months ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 6 years ago
- Web user interface for the Terra platform☆52Updated this week
- BioThings API framework - Making high-performance API for biological annotation data☆46Updated this week
- This repo is for the metadata schemas associated with the HCA☆65Updated 2 weeks ago
- Python graph database framework for bioinformatics☆92Updated 2 years ago
- Standard for describing and searching biomedical data developed by the Global Alliance for Genomics & Health.☆24Updated 11 months ago
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆27Updated 2 weeks ago
- GORpipe is a tool based on a genomic ordered relational architecture and allows analysis of large sets of genomic and phenotypic tabular …☆41Updated last week
- deploy a snakemake pipeline directly from version control (under development)☆21Updated 2 weeks ago
- The command-line interface to GGD☆42Updated 2 years ago
- An opinionated Cromwell orchestration manager.☆40Updated last year
- Extensible specification for representing and uniquely identifying biological sequence variation☆80Updated this week