A computational framework for tetrad-based genotyping & recombination landscape analysis
☆11Feb 18, 2025Updated last year
Alternatives and similar repositories for RecombineX
Users that are interested in RecombineX are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- LRSDAY: Long-read Sequencing Data Analysis for Yeasts☆34Aug 21, 2026Updated 2 months ago
- A scalable variant calling and benchmarking framework supporting both short and long reads.☆14Sep 28, 2025Updated last year
- Graph Variant Benchmarking for the HPRC2☆11May 26, 2026Updated 4 months ago
- classification of higher-order structural variants from breakpoint data☆11Jan 8, 2018Updated 8 years ago
- de novo variant calling in trio using Nanopore long-reads☆15Aug 11, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- CReSIL: Accurate Identification of Extrachromosomal Circular DNA from Long-read Sequences☆14Aug 21, 2025Updated last year
- Annotation Pipeline for NLR genes☆17Dec 6, 2018Updated 7 years ago
- DarkHorse2 source code☆11May 3, 2022Updated 4 years ago
- Software GMATA for SSR mining, marker designing, genotyping, plot etc.☆18Oct 6, 2025Updated last year
- simuG: a general-purpose genome simulator☆105Jun 18, 2025Updated last year
- Needleman-Wunsch Algorithm for global alignment and local alignment☆12Feb 12, 2020Updated 6 years ago
- Analisi dati del COVID 19 in Italia☆11Apr 24, 2020Updated 6 years ago
- ☆77Sep 24, 2024Updated 2 years ago
- interactive Multi Objective K-mer Analysis☆25Mar 5, 2023Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Detecting natural selection from population-based genetic data☆30Mar 13, 2019Updated 7 years ago
- Python3 command-line and GUI tools for common codon usage statistics given a FASTA of Coding sequences☆13Dec 9, 2025Updated 10 months ago
- PacBio BAM C++ library☆20Aug 14, 2023Updated 3 years ago
- Filter SAM file for soft and hard clipped alignments☆53Dec 31, 2025Updated 9 months ago
- MUM&Co uses Whole Genome Alignment information provided by MUMmer (only v4) to detect Structural Variation☆76Jan 12, 2026Updated 9 months ago
- Software for detecting regions of BrdU and EdU incorporation in Oxford Nanopore reads.☆46Oct 2, 2026Updated 3 weeks ago
- This repository has been archived, currently maintained version is at https://github.com/iii-companion/companion☆21Mar 22, 2021Updated 5 years ago
- Just Annotate My Genome☆19May 21, 2026Updated 5 months ago
- new repo☆28May 18, 2021Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- The NanoPipe pipeline analyzes reads generated by the Oxford Nanopore sequencing devices. As a result, it provides alignments to any targ…☆18Dec 21, 2018Updated 7 years ago
- Basecalling configuration prediction from FASTQ files☆34Mar 17, 2026Updated 7 months ago
- Convert .gbk or .embl to .gff (and optionally .fa) (required for QUAST)☆17Jun 19, 2014Updated 12 years ago
- Tumor-normal variant calling workflow using HiFi reads☆31Mar 4, 2026Updated 7 months ago
- WinPCA. A package for windowed principal component analysis.☆54Jun 9, 2026Updated 4 months ago
- Scripts for normalizing coverage in samples with highly amplified regions☆10Jan 19, 2021Updated 5 years ago
- An easy way to run BioNano genomic analysis☆27Apr 9, 2021Updated 5 years ago
- A universal genomic coordinate translator for comparative genomics☆12Jul 6, 2017Updated 9 years ago
- Alignment, quantification and fusion prediction from long RNA reads☆10Apr 11, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Python-based Illumina methylation array quality control software.☆10Jul 20, 2023Updated 3 years ago
- ☆13Oct 5, 2026Updated 2 weeks ago
- ☆21Mar 4, 2024Updated 2 years ago
- ☆32Aug 2, 2022Updated 4 years ago
- Bax File Decoder and Data Compressor☆33Jan 3, 2024Updated 2 years ago
- Chromosome Scale Assembler: A high-throughput chromosome scale genome assembly pipeline for vertebrate genomes☆10Oct 16, 2024Updated 2 years ago
- The final version 2 release of our software to detect core genes in eukaryotic genomes☆30Mar 31, 2015Updated 11 years ago