spodell / Darkhorse2Links
DarkHorse2 source code
☆10Updated 3 years ago
Alternatives and similar repositories for Darkhorse2
Users that are interested in Darkhorse2 are comparing it to the libraries listed below
Sorting:
- Download NCBI assembly genomes with ftp. rsync, ascp☆12Updated 3 years ago
- ☆33Updated 4 years ago
- Quality control plotting for long reads☆10Updated last year
- Add multiple thread function for genome comparison☆16Updated 4 years ago
- ☆26Updated 4 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆63Updated 5 years ago
- Automatic evaluation of HGTs☆30Updated 9 months ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- Haploidy and Size Completeness Estimation☆13Updated last year
- Data analysis of Funannotate and Orthofinder outputs to Pangenome results☆23Updated 5 years ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆38Updated 2 years ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 5 years ago
- Improved Phased Assembler☆28Updated 3 years ago
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆47Updated 4 years ago
- genomic alignment similarity search tool☆18Updated 6 months ago
- Pangenome analysis of eukaryotes.☆20Updated 5 years ago
- STAG: Species Tree from All Genes☆34Updated 6 years ago
- BUSCOMP: BUSCO Compiler and Comparison tool☆21Updated last year
- Dinoflagellate Annotation Workflow☆15Updated 3 years ago
- A genome assembly assessment pipeline.☆37Updated 2 years ago
- A high performance tool to identify orthologs and paralogs across genomes.☆27Updated 2 years ago
- An R package to infer and analyze synteny networks from protein sequences☆34Updated 3 months ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆28Updated 2 months ago
- Multi-genome synteny block visualization tool☆47Updated last month
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆26Updated 2 months ago
- Genome-Genome circle synteny☆25Updated last year
- Genome alignment and synteny plots☆33Updated 2 years ago
- Correcting errors in noisy long reads using variation graphs☆50Updated 3 years ago
- ☆28Updated last year
- Scaffolding with Ultralong Reads☆15Updated 5 years ago