spodell / Darkhorse2
DarkHorse2 source code
☆9Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for Darkhorse2
- Dinoflagellate Annotation Workflow☆12Updated 2 years ago
- Improved Phased Assembler☆28Updated 2 years ago
- Download NCBI assembly genomes with ftp. rsync, ascp☆11Updated 2 years ago
- genomic alignment similarity search tool☆19Updated 5 months ago
- Data analysis of Funannotate and Orthofinder outputs to Pangenome results☆17Updated 4 years ago
- Reproducible scripts and notebooks for 2019 paper on population genetics in metagenomes☆15Updated 4 years ago
- Automatic evaluation of HGTs☆25Updated 2 months ago
- Add multiple thread function for genome comparison☆15Updated 3 years ago
- ☆26Updated 3 years ago
- ☆19Updated 3 months ago
- A high performance tool to identify orthologs and paralogs across genomes.☆27Updated last year
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆27Updated last year
- BUSCOMP: BUSCO Compiler and Comparison tool☆21Updated 2 months ago
- Domain based annotation of transposable elements☆19Updated last month
- General purpose population genetics software☆12Updated 5 years ago
- STAG: Species Tree from All Genes☆31Updated 5 years ago
- Program for finding horizontal gene transfer using BLAST result☆11Updated last year
- ☆32Updated 3 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆59Updated 4 years ago
- PhyloBayes: phylogenetic reconstruction using infinite mixtures (CAT and CAT-GTR) -- serial version (for MPI, see pbmpi.git)☆13Updated 3 years ago
- scripts to parse and analyse MCScanX collinearity output☆29Updated 4 years ago
- assembly evaluation tool☆34Updated 2 years ago
- ZGA prokaryotic genome assembly and annotation pipeline☆11Updated 2 months ago
- Genome alignment and synteny plots☆27Updated last year
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆34Updated 3 weeks ago
- Haploidy and Size Completeness Estimation☆13Updated 7 months ago
- A Hi-C scaffolding method☆22Updated 2 years ago
- Pathway Tools multiprocessing wrapper (for PathoLogic).☆15Updated 7 months ago
- a broadly applicable tool for automated gene identification and retrieval☆28Updated 4 months ago
- Small and simple scripts useful for various bioinformatics purposes e.g. extract sequences from fasta files☆20Updated last year