Alternatives and similar repositories for Needleman-Wunsch-Algorithm:

Users that are interested in Needleman-Wunsch-Algorithm are comparing it to the libraries listed below

• JSB-UCLA / Clipper
  A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions
  ☆38Updated 2 years ago
• dzhang32 / dasper
  Detecting Aberrant Splicing Events from RNA-sequencing data
  ☆16Updated last month
• jernst98 / STEM_DREM
  Short Time-series Expression Miner (STEM) and Dynamic Regulatory Events Miner (DREM)
  ☆20Updated 4 years ago
• HenrikBengtsson / TopDom
  R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes
  ☆19Updated last year
• Danko-Lab / rtfbs_db
  Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.
  ☆22Updated 6 years ago
• csoneson / rna_velocity_quant
  Evaluation of the effect of quantification choices on RNA velocity estimates
  ☆27Updated 3 years ago
• ParkerLab / bioinf545
  ATAC-seq lab for BIOINF545
  ☆25Updated 10 months ago
• ManchesterBioinference / IntegratingATAC-RNA-HiC
  scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper
  ☆23Updated 2 years ago
• hiclib / pastis
  Poisson-based algorithm for stable inference of DNA Structure
  ☆35Updated 2 years ago
• Simon-Coetzee / motifBreakR
  A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.
  ☆28Updated 5 months ago
• ConesaLab / MultiPower
  Statistical power studies for multi-omics experiments.
  ☆30Updated last week
• thelovelab / rnaseqDTU
  RNA-seq workflow: differential transcript usage
  ☆20Updated last year
• gagneurlab / FRASER-analysis
  Accompanying analysis code for the FRASER manuscript
  ☆26Updated 4 years ago
• mdozmorov / HiCcompareWorkshop
  Differential Hi-C Data Analysis Workshop https://currentprotocols.onlinelibrary.wiley.com/doi/abs/10.1002/cpbi.76
  ☆15Updated 3 years ago
• PhanstielLab / bedtoolsr
  R package wrapping bedtools
  ☆38Updated 5 months ago
• epigen / open_pipelines
  Pipelines for NGS data preprocessing by the Bock lab and friends
  ☆20Updated 2 years ago
• hbc / tutorials
  This repo contains tutorials for different NGS analysis methods
  ☆13Updated 3 years ago
• 10XGenomics / cellranger-atac
  ☆18Updated 4 years ago
• tushiqi / MAnorm2
  MAnorm2 for Normalizing and Comparing ChIP-seq Samples
  ☆32Updated 2 years ago
• lpantano / DEGreport
  Create a cromphensive report of DEG list coming from any analysis of RNAseq data
  ☆24Updated 11 months ago
• BIMSBbioinfo / HOT-or-not-examining-the-basis-of-high-occupancy-target-regions
  HOT regions paper
  ☆11Updated 5 years ago
• sa-lee / superintronic
  A tidy interface for coverage analysis
  ☆24Updated 4 years ago
• CompEpigen / methrix
  An R for fast and flexible DNA methylation analysis
  ☆31Updated 6 months ago
• nasqar / ClusterProfShinyGSEA
  A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries
  ☆18Updated 5 years ago
• mdozmorov / blogs
  Links to data science, bioinformatics, statistics, and machine learning resources
  ☆18Updated 4 years ago
• astrazeneca-cgr-publications / JARVIS
  JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes
  ☆22Updated 3 weeks ago
• griffithlab / genviz.org
  Genomic data interpretation and visualization Workshop
  ☆19Updated last year
• tiagochst / ELMER
  Enhancer Linking by Methylation/Expression Relationship (ELMER) is package to identify tumor-specific changes in DNA methylation within d…
  ☆23Updated last year
• smw1414 / circlncRNAnet
  An integrated web-based resource for mapping functional networks of long or circular forms of non-coding RNAs
  ☆10Updated 5 years ago
• hemberg-lab / MicroExonator
  Snakemake pipeline for microexon discovery and quantification
  ☆20Updated 2 weeks ago