kWeissenow / EMBER2Links
Alignment-free structure prediction using protein language models
☆22Updated 2 years ago
Alternatives and similar repositories for EMBER2
Users that are interested in EMBER2 are comparing it to the libraries listed below
Sorting:
- Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…☆37Updated 3 weeks ago
- ☆69Updated last year
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- ☆43Updated last year
- ☆25Updated 2 years ago
- Protein language model trained on coding DNA☆50Updated 11 months ago
- ☆108Updated last year
- ☆36Updated 8 months ago
- AlphaLink: Integrating crosslinking MS data into OpenFold☆68Updated last year
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆59Updated 5 months ago
- A complete, open-source, end-to-end re-implementation of the Church Lab's low-N eUniRep in silico protein engineering pipeline presented …☆27Updated 5 years ago
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆73Updated 2 weeks ago
- Physicochemical properties, indices and descriptors for amino-acid sequences.☆103Updated 3 weeks ago
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆104Updated 2 weeks ago
- Fast and accurate protein structure prediction☆54Updated 8 months ago
- ☆53Updated last month
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆59Updated 4 years ago
- Graph Network for protein-protein interface including language model features☆32Updated last year
- Fast protein structure searching or your money back☆113Updated 5 months ago
- Biological prediction models made simple.☆44Updated last month
- ☆30Updated last year
- GTalign, high-performance protein structure alignment, superposition and search☆50Updated last month
- Detection of remote homology by comparison of protein language model representations☆55Updated 9 months ago
- Neural networks for deep mutational scanning data☆69Updated 3 months ago
- scripts and facilities for in-silico mutagenesis with FoldX☆59Updated 2 months ago
- Feature map and function annotation of Proteins☆33Updated last year
- A machine learning based protein disorder predictor.☆25Updated 3 weeks ago
- Evolutionary velocity with protein language models☆94Updated last year
- ☆30Updated last year
- Code repository of "Deep generative design of RNA family sequences"☆36Updated last year