Alternatives and similar repositories for bindPredict:

Users that are interested in bindPredict are comparing it to the libraries listed below

• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆57Updated 3 years ago
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆89Updated last year
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆35Updated 5 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated 9 months ago
• tymor22 / tm-vec
  ☆66Updated 5 months ago
• Doudna-lab / GARNET_DL
  ☆35Updated 2 months ago
• gv20-therapeutics / antibody-in-pytorch
  Machine learning models for antibody sequences in PyTorch
  ☆39Updated 3 years ago
• fhalab / evSeq
  Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
  ☆32Updated 2 years ago
• oxpig / CaLM
  Protein language model trained on coding DNA
  ☆46Updated 5 months ago
• the-protein-engineering-tournament / pet-pilot-2023
  Results and data from the pilot round of the Protein Engineering Tournament
  ☆28Updated 3 months ago
• xinyu-dev / annotate_v
  Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
  ☆29Updated last year
• GreiffLab / manuscript_ab_epitope_interaction
  ☆24Updated last year
• tristanic / pae_to_domains
  Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix
  ☆35Updated 2 years ago
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆34Updated last year
• leandroradusky / pyfoldx
  pyFoldX: python bindings for FoldX.
  ☆44Updated 3 years ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆69Updated 2 months ago
• AbSciBio / igdesign
  ☆34Updated 2 months ago
• DeepRank / DeepRank-GNN-esm
  Graph Network for protein-protein interface including language model features
  ☆29Updated 11 months ago
• jlparkI / AntPack
  Tools for annotation, processing and ML for antibody sequences
  ☆27Updated this week
• brennanaba / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆48Updated 4 months ago
• SNU-CSSB / RF2-Lite
  ☆25Updated 9 months ago
• TattaBio / gLM2
  ☆58Updated 5 months ago
• ievapudz / TemStaPro
  TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
  ☆51Updated 11 months ago
• PDB-REDO / alphafill
  AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…
  ☆95Updated last month
• alchemab / antiberta
  Public repository describing training and testing of AntiBERTa.
  ☆58Updated last year
• HySonLab / Directed_Evolution
  Protein Design by Machine Learning guided Directed Evolution
  ☆35Updated 7 months ago
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆63Updated 7 years ago
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆60Updated 7 months ago
• gitter-lab / nn4dms
  Neural networks for deep mutational scanning data
  ☆68Updated 4 months ago