Alternatives and similar repositories for bindPredict

Users that are interested in bindPredict are comparing it to the libraries listed below

• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆59Updated 4 years ago
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆93Updated last year
• gitter-lab / nn4dms
  Neural networks for deep mutational scanning data
  ☆69Updated last month
• Doudna-lab / GARNET_DL
  ☆35Updated 6 months ago
• Rostlab / EAT
  Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…
  ☆37Updated 5 months ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆89Updated last year
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆54Updated 3 months ago
• tymor22 / protein-vec
  Repository for Protein-Vec, a protein embedding mixture of experts model
  ☆38Updated last year
• DeepRank / DeepRank-GNN-esm
  Graph Network for protein-protein interface including language model features
  ☆32Updated last year
• jlparkI / AntPack
  Tools for annotation, processing and ML for antibody sequences
  ☆31Updated this week
• JudeWells / chainsaw
  ☆41Updated 9 months ago
• sacdallago / biotrainer
  Biological prediction models made simple.
  ☆44Updated this week
• normandavey / AlphaFold2-IDR-complex-prediction
  ☆40Updated 3 years ago
• GreiffLab / manuscript_ab_epitope_interaction
  ☆25Updated last year
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆38Updated last year
• fhalab / evSeq
  Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
  ☆34Updated 3 years ago
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆57Updated 7 months ago
• KIT-MBS / pydca
  Direct coupling analysis software for protein and RNA sequences
  ☆50Updated 2 months ago
• SNU-CSSB / RF2-Lite
  ☆30Updated last year
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆66Updated 7 years ago
• brennanaba / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆51Updated 8 months ago
• oxpig / CaLM
  Protein language model trained on coding DNA
  ☆47Updated 8 months ago
• labstructbioinf / pLM-BLAST
  Detection of remote homology by comparison of protein language model representations
  ☆54Updated 7 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆50Updated 3 months ago
• althonos / peptides.py
  Physicochemical properties, indices and descriptors for amino-acid sequences.
  ☆99Updated 3 months ago
• tristanic / pae_to_domains
  Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix
  ☆35Updated 2 years ago
• tymor22 / tm-vec
  ☆68Updated 9 months ago
• psipred / psipred
  PSIPRED Protein Secondary Structure Predictor
  ☆57Updated last week
• kansil / PROBE
  Trainable representation analysis study repository
  ☆43Updated 3 years ago
• minmarg / gtalign_alpha
  GTalign, high-performance protein structure alignment, superposition and search
  ☆46Updated 2 weeks ago