Alternatives and similar repositories for bindPredict

Users that are interested in bindPredict are comparing it to the libraries listed below

• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆59Updated 4 years ago
• tymor22 / protein-vec
  Repository for Protein-Vec, a protein embedding mixture of experts model
  ☆38Updated last year
• Rostlab / EAT
  Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…
  ☆38Updated 3 months ago
• DeepRank / DeepRank-GNN-esm
  Graph Network for protein-protein interface including language model features
  ☆33Updated last year
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆60Updated 8 months ago
• Doudna-lab / GARNET_DL
  ☆36Updated 10 months ago
• duolinwang / MusiteDeep_web
  This repository contains the stand-alone tool for MusiteDeep server
  ☆34Updated 5 years ago
• TurtleTools / geometricus
  A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.
  ☆41Updated 2 years ago
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆94Updated this week
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆90Updated last year
• gitter-lab / nn4dms
  Neural networks for deep mutational scanning data
  ☆70Updated 6 months ago
• JudeWells / chainsaw
  ☆44Updated last year
• SNU-CSSB / RF2-Lite
  ☆31Updated last year
• tadorfer / protlearn
  A Python package for extracting protein sequence features
  ☆62Updated 3 years ago
• psipred / DMPfold2
  Fast and accurate protein structure prediction
  ☆56Updated 10 months ago
• brennanaba / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆57Updated last year
• AIforGreatGood / biotransfer
  Machine learning-driven antibody design
  ☆62Updated 2 years ago
• tristanic / pae_to_domains
  Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix
  ☆35Updated 3 years ago
• labstructbioinf / pLM-BLAST
  Detection of remote homology by comparison of protein language model representations
  ☆57Updated 11 months ago
• alexarnimueller / modlAMP
  Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.
  ☆61Updated 8 months ago
• oxpig / CaLM
  Protein language model trained on coding DNA
  ☆51Updated last year
• jlparkI / AntPack
  Tools for annotation, processing and ML for antibody sequences
  ☆34Updated this week
• GreiffLab / manuscript_ab_epitope_interaction
  ☆25Updated last year
• TattaBio / gLM2
  ☆74Updated last year
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆48Updated 7 months ago
• normandavey / AlphaFold2-IDR-complex-prediction
  ☆39Updated 4 years ago
• KIT-MBS / pydca
  Direct coupling analysis software for protein and RNA sequences
  ☆53Updated 4 months ago
• aqlaboratory / hsm
  Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
  ☆70Updated last year
• csi-greifflab / manuscript_insilico_antibody_generation
  ☆23Updated 4 years ago
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆70Updated 8 years ago