Prediction of B-cell epitopes from amino acid sequences using deep neural networks.
☆18Sep 7, 2022Updated 3 years ago
Alternatives and similar repositories for EpiDope
Users that are interested in EpiDope are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Prediction of B-cell epitopes from amino acid sequences using deep neural networks.☆16Aug 3, 2021Updated 4 years ago
- A bioinformatics best-practice analysis pipeline for epitope prediction and annotation☆51Apr 1, 2026Updated 2 weeks ago
- Code for the antibody deep learning paper.☆16Feb 28, 2022Updated 4 years ago
- Machine learning models for antibody sequences in PyTorch☆41May 25, 2021Updated 4 years ago
- ☆12Jun 19, 2018Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- catELMo: Context-Aware Amino Acid Embedding Advances Analysis of TCR-Epitope Interactions☆15Apr 10, 2025Updated last year
- ☆22Apr 10, 2025Updated last year
- Python package and command line tool for epitope prediction☆53Aug 2, 2024Updated last year
- Fast and versatile biomolecular structure PDB file parser using SQL queries☆24Mar 17, 2023Updated 3 years ago
- ☆40Apr 24, 2018Updated 7 years ago
- Deep learning prediction of protein residue-residue distances☆23Jun 28, 2022Updated 3 years ago
- DeepLocPro repository.☆18Feb 19, 2026Updated last month
- Tool for analysing viral diversity from High Throughput Sequencing☆12Nov 20, 2025Updated 4 months ago
- CryoBoltz code for protein structure prediction with cryo-EM guidance. NeurIPS 2025.☆30Nov 30, 2025Updated 4 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆10Feb 18, 2020Updated 6 years ago
- ☆20Jun 10, 2024Updated last year
- ☆23Nov 28, 2025Updated 4 months ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆36Nov 18, 2023Updated 2 years ago
- single-cell and bulk RNA-seq analyses from counts → pathways → drug candidates.☆21Jan 22, 2026Updated 2 months ago
- Sequence-based protein solubility prediction using multidimensional embedding☆13Apr 19, 2021Updated 4 years ago
- Repo contains source code of the SurfaceID paper☆28Mar 13, 2024Updated 2 years ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆129Feb 26, 2025Updated last year
- ☆13Mar 16, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Calculate the RMSD between two antibody structure (including nanobody and antibody).☆11May 19, 2023Updated 2 years ago
- Report salient qPCR primer/probe or immune epitope mismatches info against a set of pathogen isolate genomes☆16Mar 11, 2025Updated last year
- Graph Splitting Method☆13Jul 10, 2019Updated 6 years ago
- Polyreactivity Website☆21Jun 26, 2023Updated 2 years ago
- Biobb_amber is a BioBB category for AMBER MD package.☆14Mar 17, 2026Updated last month
- Introduction to Python Course Lectures and Supportive Articles☆10Mar 18, 2023Updated 3 years ago
- ProtFeat is protein feature extraction tool that utilizes POSSUM and iFeature.☆20Sep 16, 2024Updated last year
- the analysis script for PrismNet☆10May 17, 2020Updated 5 years ago
- ☆48Jan 10, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- The ProteoCancer Analysis Suite (PCAS) utilizes the CPTAC database to integrate proteomics, phosphoproteomics, and transcriptomics for ca…☆21Jun 18, 2025Updated 9 months ago
- BioMM: Biological-informed Multi-stage Machine learning framework for phenotype prediction using omics data☆14Jan 3, 2023Updated 3 years ago
- Prediction of Antibody CDR and protein loop flexibility☆17Sep 17, 2025Updated 7 months ago
- ☆13Oct 19, 2023Updated 2 years ago
- ☆11May 4, 2021Updated 4 years ago
- Graph Network for protein-protein interface including language model features☆34Mar 26, 2024Updated 2 years ago
- DeepSP is an antibody-specific surrogate CNN model that can generate 30 spatial properties of an antibody solely based on their sequences…☆19Feb 23, 2026Updated last month