xinyu-dev / annotate_vLinks
Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
☆30Updated 2 years ago
Alternatives and similar repositories for annotate_v
Users that are interested in annotate_v are comparing it to the libraries listed below
Sorting:
- ☆41Updated 4 months ago
- Machine learning models for antibody sequences in PyTorch☆40Updated 4 years ago
- ☆70Updated 4 years ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 4 years ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- ☆23Updated 4 years ago
- ☆51Updated this week
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆42Updated last year
- Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.☆61Updated 4 months ago
- RNA Multiple Sequence Alignment☆43Updated 2 years ago
- ☆43Updated 6 months ago
- pyFoldX: python bindings for FoldX.☆48Updated 3 years ago
- Set of useful HADDOCK utility scripts☆53Updated 11 months ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆60Updated 4 years ago
- This repository contains the stand-alone tool for MusiteDeep server☆34Updated 4 years ago
- A Python 3 version of the protein descriptor package propy☆43Updated 2 years ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- Direct coupling analysis software for protein and RNA sequences☆51Updated 2 weeks ago
- scripts and facilities for in-silico mutagenesis with FoldX☆57Updated 3 weeks ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆58Updated 7 months ago
- Graph Network for protein-protein interface including language model features☆32Updated last year
- Public repository describing training and testing of AntiBERTa.☆60Updated 2 years ago
- ☆36Updated 6 months ago
- Code repository of "Deep generative design of RNA family sequences"☆35Updated last year
- ☆38Updated 3 years ago
- Protein language model trained on coding DNA☆47Updated 9 months ago
- Ultra-fast in-silico structure mutation☆34Updated 3 months ago
- Neural networks for deep mutational scanning data☆69Updated 2 months ago
- A command-line interface and Python library for generating AlphaFold3 input files.☆35Updated 2 months ago
- ☆86Updated 2 years ago