xinyu-dev / annotate_vLinks
Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
☆30Updated 2 years ago
Alternatives and similar repositories for annotate_v
Users that are interested in annotate_v are comparing it to the libraries listed below
Sorting:
- Machine learning models for antibody sequences in PyTorch☆41Updated 4 years ago
- ☆45Updated 9 months ago
- Tools for annotation, processing and ML for antibody sequences☆35Updated last week
- ☆73Updated 5 years ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆111Updated 4 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- pyFoldX: python bindings for FoldX.☆53Updated 4 years ago
- ☆23Updated 4 years ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆60Updated 4 years ago
- ☆47Updated 11 months ago
- Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.☆61Updated 9 months ago
- ☆54Updated 4 months ago
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- Ultra-fast in-silico structure mutation☆36Updated 8 months ago
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆46Updated last year
- Neural networks for deep mutational scanning data☆71Updated 6 months ago
- Code repository of "Deep generative design of RNA family sequences"☆40Updated last month
- Solvent Accessible Surface calculation software for biomolecules.☆18Updated 2 years ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆61Updated last year
- Predict the structure of immune receptor proteins☆56Updated last year
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago
- DeepAAI☆35Updated last year
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆61Updated 3 weeks ago
- Machine learning-driven antibody design☆62Updated 2 years ago
- ☆21Updated 3 years ago
- Protein language model trained on coding DNA☆52Updated last year
- ☆90Updated 3 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 5 months ago
- Set of useful HADDOCK utility scripts☆56Updated 3 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆60Updated 8 months ago