Alternatives and similar repositories for manuscript_ab_epitope_interaction

Users that are interested in manuscript_ab_epitope_interaction are comparing it to the libraries listed below

• csi-greifflab / manuscript_insilico_antibody_generation
  ☆23Updated 4 years ago
• xinyu-dev / annotate_v
  Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
  ☆30Updated 2 years ago
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆60Updated 4 years ago
• AIforGreatGood / biotransfer
  Machine learning-driven antibody design
  ☆62Updated 2 years ago
• Rostlab / bindPredict
  Prediction of binding residues for metal ions, nucleic acids, and small molecules.
  ☆34Updated 3 months ago
• duolinwang / MusiteDeep_web
  This repository contains the stand-alone tool for MusiteDeep server
  ☆34Updated 5 years ago
• biomed-AI / GPSite
  Geometry-aware protein binding site predictor
  ☆25Updated last year
• Faezov / PDBrenum
  ☆30Updated 7 months ago
• Wang-lab-UCSD / RESP
  The code used to generate the results from Parkinson / Hard et al. 2022
  ☆17Updated 5 months ago
• jlparkI / AntPack
  Tools for annotation, processing and ML for antibody sequences
  ☆35Updated this week
• wells-wood-research / BAlaS
  Source code for the BUDE Alanine Scan web application.
  ☆12Updated 6 months ago
• piercelab / tcrmodel2
  ☆45Updated 9 months ago
• gitter-lab / nn4dms
  Neural networks for deep mutational scanning data
  ☆71Updated 6 months ago
• wells-wood-research / de-stress
  DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.
  ☆28Updated 9 months ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆90Updated last year
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆70Updated 8 years ago
• oxpig / p-IgGen
  p-IgGen: A Generative Paired Antibody Language Model
  ☆13Updated 7 months ago
• Doudna-lab / GARNET_DL
  ☆36Updated 11 months ago
• ChengfeiYan / PLMGraph-Inter
  A program fror inter-protein contact prediction from structures of interacting proteins
  ☆19Updated last year
• gv20-therapeutics / antibody-in-pytorch
  Machine learning models for antibody sequences in PyTorch
  ☆41Updated 4 years ago
• SwitchLab-VIB / EvolveX
  EvolveX, a de novo antibody computational design pipeline.
  ☆12Updated 3 months ago
• dmnfarrell / epitopepredict
  Python package and command line tool for epitope prediction
  ☆52Updated last year
• yjcyxky / antibody-dl
  A Collection of Platform, Tools, and Resources for Antibody Engineering
  ☆21Updated 2 years ago
• DeepRank / DeepRank-GNN-esm
  Graph Network for protein-protein interface including language model features
  ☆34Updated last year
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆65Updated 5 months ago
• dohlee / antiberty-pytorch
  An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.
  ☆26Updated last year
• MIDIfactory / AlphaFastPPi
  Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening
  ☆39Updated last year
• ivanjayapurna / low-n-protein-engineering
  A complete, open-source, end-to-end re-implementation of the Church Lab's low-N eUniRep in silico protein engineering pipeline presented …
  ☆27Updated 5 years ago
• lehner-lab / doubledeepms
  Source code for fitting thermodynamic models (MoCHI), downstream analyses and to reproduce all figures in the following publication: Mapp…
  ☆21Updated 2 years ago
• abelavit / PepCNN
  ☆22Updated last year