kansil / PROBELinks
Trainable representation analysis study repository
☆44Updated 3 years ago
Alternatives and similar repositories for PROBE
Users that are interested in PROBE are comparing it to the libraries listed below
Sorting:
- ☆36Updated 8 months ago
- Protein language model trained on coding DNA☆49Updated 11 months ago
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆30Updated 2 years ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆59Updated 4 years ago
- ☆25Updated last year
- ☆42Updated 5 months ago
- Evolutionary velocity with protein language models☆94Updated last year
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆67Updated 2 years ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆33Updated 3 weeks ago
- ☆68Updated 11 months ago
- RNA Multiple Sequence Alignment☆45Updated 2 years ago
- Code repository of "Deep generative design of RNA family sequences"☆35Updated last year
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆104Updated 2 weeks ago
- Repository for Protein-Vec, a protein embedding mixture of experts model☆38Updated last year
- Machine learning-driven antibody design☆60Updated 2 years ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆34Updated 2 years ago
- Neural networks for deep mutational scanning data☆69Updated 3 months ago
- ☆108Updated last year
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆60Updated last year
- Graph Network for protein-protein interface including language model features☆32Updated last year
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆42Updated last year
- ☆46Updated 8 months ago
- Predict the structure of immune receptor proteins☆53Updated 10 months ago
- The standalone version of SPOT-1D-Single available for public use for research purposes.☆24Updated last year
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- This repository contains the stand-alone tool for MusiteDeep server☆34Updated 4 years ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆52Updated last month
- Machine learning models for antibody sequences in PyTorch☆41Updated 4 years ago
- Inference code for Bio-Inspired Antibody Language Model☆25Updated last year